| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2130 |
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| Symbol | |
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| ID | 3967514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2719367 |
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| End bp | 2720233 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637921220 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_527602 |
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| Protein GI | 90021775 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGGAA TTATTTTAGC AGGCGGCTCT GGAACTCGGC TTTATCCGAT AACCAAGGGT
GTATCCAAGC AGCTGTTACC TGTTTACGAC AAGCCTATGA TCTATTATCC AATTTCAGTG
TTAATGCTTG CTGGAATTCG TGACATATTA GTGATTACCA CCCCGGAAGA TCAATCTTCG
TTTAAGCGTG TATTGGGAGA TGGTTCTGGT TTTGGTATAA GCCTTAAGTA TGCAGTTCAA
CCTACACCAG ATGGTTTAGC GCAAGCATTT ATTATAGGTG AAGACTTTAT TGGTGGCGAG
GCTGTGTGCT TGGCGCTAGG TGATAATATT TTTTGGGGGC ATGGCTTTAC GCCAATTTTA
AAGCGTGCTG CCACAAGGCC TAAAGGTGCG ACGATATTTG GATATCAGGT GAAAGATCCC
GAGAGATTTG GGGTGGTTGA GTTTGATTGT AATAGAAAAG TTGTATCAAT AGAAGAAAAA
CCATCGTCGC CTAAGTCAAA TTTTGCGGTT ACTGGTTTGT ACTTTTACGA CAACACTGTT
GTCGACATAG CGAAAAATGT TGAGCCTTCT GAGCGTGGTG AATTGGAGAT AACAGCAGTA
AATCAGGCTT ATCTTAAGCA AGGTGATTTA AATGTTGAAT TGTTAGGGCG TGGATTCGCT
TGGTTGGATA CGGGTACTCA TGATAGTTTG TTAGAAGCGG CATTATTTGT CGATACAATA
GAAAAAAGGC AAGGTTATAA AATTGCTTGT TTGGAAGAGG TCGCTTTAAA TAACGGTTGG
CTATCTGCTC AGGAGCTTGC TGTTATTTCT AATGGTATGT CAAAAACTTC ATATAGAAGA
TATTTGAGGG ATCTGTTGAA AAAATGA
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| Protein sequence | MRGIILAGGS GTRLYPITKG VSKQLLPVYD KPMIYYPISV LMLAGIRDIL VITTPEDQSS
FKRVLGDGSG FGISLKYAVQ PTPDGLAQAF IIGEDFIGGE AVCLALGDNI FWGHGFTPIL
KRAATRPKGA TIFGYQVKDP ERFGVVEFDC NRKVVSIEEK PSSPKSNFAV TGLYFYDNTV
VDIAKNVEPS ERGELEITAV NQAYLKQGDL NVELLGRGFA WLDTGTHDSL LEAALFVDTI
EKRQGYKIAC LEEVALNNGW LSAQELAVIS NGMSKTSYRR YLRDLLKK
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