| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2107 |
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| Symbol | sdhB |
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| ID | 3967491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2693806 |
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| End bp | 2694510 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637921197 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_527579 |
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| Protein GI | 90021752 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00182295 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAAG TAGAAGTTTA TCGCTACAAC CCAGAAACAG ACAAAGAGCC TTACATGAAG
TCCTACGATG TGGACACGCA AGGCAAAGAC TTGATGGTTC TGGATGTGCT TGAGTTATTG
AAATCTCAAG ATCCTAGCCT AGCTTACCGT CGCTCGTGCC GTGAAGGTGT GTGTGGGTCT
GACGGTATGA ACATTGCTGG TAAAAACGGC TTGGCGTGCA TTACACCTCT GTCTGAGTGT
GTAAAAAAGG GCAAGTTAGT ATTGCGCCCA TTGCCAGGCT TGCCAGTAGT GCGCGATTTG
GTGGTAGACA TGGCTCAGTT TTATGAGCAA TACCGCAAAA TTGAGCCTTA TTTGCAAAAC
AACACGCCTG CACCCGCTAT TGAGCGTTTG CAGTCGCCAG AAGATCGTGA AAAGTTAGAT
GGTTTATATG AGTGCATCTT GTGCGCTTGT TGCTCTACTA GCTGCCCATC TTTCTGGTGG
AACCCAGATA AATTTATTGG CCCAGCTGGC TTGTTGCAGG CTTATCGCTT TTTGGCAGAT
AGCCGCGATA CGGCTACCGA CGACCGCTTG TCTAATTTGG ATGACCCTTT CAGCGTATTC
CGTTGTCATG GCATTCAAAA TTGTGTGGAC GTATGTCCAA AAGGCTTAAA TCCAACGCGT
GCAATTGGAC ATATTCGCAA TATGCTCTTG CAGCGAGGTA CCTAA
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| Protein sequence | MLKVEVYRYN PETDKEPYMK SYDVDTQGKD LMVLDVLELL KSQDPSLAYR RSCREGVCGS
DGMNIAGKNG LACITPLSEC VKKGKLVLRP LPGLPVVRDL VVDMAQFYEQ YRKIEPYLQN
NTPAPAIERL QSPEDREKLD GLYECILCAC CSTSCPSFWW NPDKFIGPAG LLQAYRFLAD
SRDTATDDRL SNLDDPFSVF RCHGIQNCVD VCPKGLNPTR AIGHIRNMLL QRGT
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