| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2105 |
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| Symbol | |
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| ID | 3967489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2689457 |
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| End bp | 2690668 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637921195 |
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| Product | dihydrolipoamide succinyltransferase |
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| Protein accession | YP_527577 |
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| Protein GI | 90021750 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.206844 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATAG AAATTAAAGC ACCCACTTTT CCGGAGTCTG TTCAAGACGG TACTGTGGCA
ACTTGGCACA AGCAGCCAGG TGAAGCCTGT TCACGTGATG AGCTTATTGT TGATATTGAA
ACTGATAAGG TGGTGCTCGA AGTAGTTGCA CCGGCTGACG GTTCTATCGC TGAAATCATT
AAAGGTGAAG GCGAAATTAT TTTAAGCGGT GAAGTTATCG CTAAATTCGT AGCTGGCGCT
GCAGGTTCTG CGCCTGCTCC AGCTGCTGCC GAAGCCGCTC CAGCTGCTAG CGAAGCATCT
GAAGACGTTA TTGCTGCACC TGCTGCGCGT AAACTCGCTG CAGAAAAGGG CATCGATTTA
GCGTTAGTGA AGGGCACTGG TAAAGATGGC CGTATCACTA AAGAAGACGT AGCTGGTTAC
AAGCCTGCCG CTGCTGCAGC ACCTGCACCA GCTGCCGCGC CAAAAGCTGC TGCTCCTGCA
TCTACCGGCG CTGTAGCGCC AACTGGTTTG CGTGAAGAAA AGCGTGTACC AATGACTCGT
TTGCGTGCAC GTATTGCAGA GCGTTTGTTG GATGCCAATA ACAATACCGC AATGTTGACT
ACGTTTAACG AAGTGAATAT GGCGCCTGTT ATGAATCTGC GTAAACAATA CAAAGATTTG
TTTGAGAAAA CCCACAACGG TTCACGTTTA GGCTTCATGG GCTTTTTCGT AAAAGCTGCT
GTTGAAGCAT TGCGTCGTTT CCCTGCTGTT AACGCATCAA TCGACGGTAA CGACATGGTT
TACCACGGTT ATCAAGATGT GGGTTGTGCA GTGTCTACCG ATAAAGGTTT GGTTGTACCT
GTTTTGCGCA ACGCAGAAAA CTTGAGCATT GCTGAAATCG AAAACGGTAT TCGCGATTTC
GGTTTGCGTG CTCGCGATGG TAAGTTGGGT ATTGAAGAAA TGACCGGTGG TACTTTCACT
ATTACTAACG GTGGTGTTTT CGGTTCTTTA CTTTCAACGC CTATCTTGAA CCCACCACAA
GCGGCAATTT TGGGTATGCA CAAAATCCAA GAGCGCCCAA TGGCTGTTAA CGGTGAAGTG
AAAGTGTTGC CAATGATGTA CTTGGCGCTT TCTTACGATC ACCGGATCAT TGACGGTAAA
GAAGCGGTTC AGTTCTTGGT TACCATTAAG GACCTGCTAG AAGACCCTGC ACGTATGTTG
TTAGAGGTTT AA
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| Protein sequence | MTIEIKAPTF PESVQDGTVA TWHKQPGEAC SRDELIVDIE TDKVVLEVVA PADGSIAEII
KGEGEIILSG EVIAKFVAGA AGSAPAPAAA EAAPAASEAS EDVIAAPAAR KLAAEKGIDL
ALVKGTGKDG RITKEDVAGY KPAAAAAPAP AAAPKAAAPA STGAVAPTGL REEKRVPMTR
LRARIAERLL DANNNTAMLT TFNEVNMAPV MNLRKQYKDL FEKTHNGSRL GFMGFFVKAA
VEALRRFPAV NASIDGNDMV YHGYQDVGCA VSTDKGLVVP VLRNAENLSI AEIENGIRDF
GLRARDGKLG IEEMTGGTFT ITNGGVFGSL LSTPILNPPQ AAILGMHKIQ ERPMAVNGEV
KVLPMMYLAL SYDHRIIDGK EAVQFLVTIK DLLEDPARML LEV
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