| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2092 |
|---|
| Symbol | |
|---|
| ID | 3967476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 2676482 |
|---|
| End bp | 2677384 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637921182 |
|---|
| Product | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase |
|---|
| Protein accession | YP_527564 |
|---|
| Protein GI | 90021737 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAA AGCCACAGAA AGAACTAAAA ACAGTAAGAG ATTGGATACG CTGGTCCGCC
ACGTGTTTTG CTCGTGGGGA TCTCTTTTTT GGCCACGGAA CCAATAATGC TTGGGATGAA
GCTGTCGCAT TAGTGATGTG GGTAGTGCAA CAACCTTTCG ACCGTTTAGA GTGGGTACTA
GATGCCAAGC TGGTTGAGGC TGAAAAGCAA CAGCTTGCCC AGCTAATCGA CAAGCGCGTG
CAGCAGCATA TTCCATTGCC TTACCTCACT GGAGAGGCGT GGTTCGCTGG TTTAAAGTTT
CATGTAACAC CAGATGTACT TATCCCGCGT TCGCCCATTG CAGAGTTAAT AGAACGCGAA
TTCCAGCCAA TGCTGCAGCA GTACCCAGCT AAAATATTGG ATCTATGCAC TGGTAGCGGC
TGCATTGGTA TTGCCTGTGC CTATGCCTTT GAAGAGGCTA TGGTAGATAT ATCTGATATA
TCCACAGCAG CATTGGATGT AGCACAGCTT AACATCGCCA ATCACACCCT GCAGGATAGG
GTAAGTACGG TTGAGTCCGA TGTGTTTGAC GGTATTACGG GCCAGTACGA TCTGATTGTG
TCTAACCCAC CGTATGTAGA TGCACAGGAT ATGGCTTCTA TTCCTGCTGA GTATCAAGTA
GAACCGCGTA TGGCCTTGGA GTCGGGGGAT GATGGCTTGG ATATTACTCG CCGTATCTTG
GCAAAGGCCG CCCAGCACTT AACTGAAGAT GGCTTGCTTG TAGTGGAAGT TGGTAACAGC
TGGGAGGCAT TAGAGGTGAG CATGCCACAT GTGCCATTCT ATTGGCCAGA ATTTGAAAAC
GGTGGGCATG GCATATTTAT GCTTACCAAG CAGCAGCTGC TCGAAATAAA TAAAGCTGCC
TAA
|
|---|
| Protein sequence | MKRKPQKELK TVRDWIRWSA TCFARGDLFF GHGTNNAWDE AVALVMWVVQ QPFDRLEWVL
DAKLVEAEKQ QLAQLIDKRV QQHIPLPYLT GEAWFAGLKF HVTPDVLIPR SPIAELIERE
FQPMLQQYPA KILDLCTGSG CIGIACAYAF EEAMVDISDI STAALDVAQL NIANHTLQDR
VSTVESDVFD GITGQYDLIV SNPPYVDAQD MASIPAEYQV EPRMALESGD DGLDITRRIL
AKAAQHLTED GLLVVEVGNS WEALEVSMPH VPFYWPEFEN GGHGIFMLTK QQLLEINKAA
|
|---|
| |