Gene Sde_2077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_2077 
Symbol 
ID3967461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2657416 
End bp2658279 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content46% 
IMG OID637921167 
Productacetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 
Protein accessionYP_527549 
Protein GI90021722 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTGGT TGGATAAAAT TGTACCAAGT GTTGTGCGCT CTGACGGACC GCGTAGTGCG 
AGTAAAGTAC CCGAAGGGTT GTGGAAAAAG TGCCCTAAAT GTGCAGCAGT ATTGTATCGC
CCAGAGCTAG AAAGCAATTT AGATGTGTGT CCAAAGTGCG ATCACCATAT GCGTATTGGC
GCGCGTCGTC GTTTGGATAT CTTTTTAGAT AAAGACGATC GCGAAGAGCT TGCAACCGAT
GTGTTGCCGG TTGACCGTCT TAAATTTAAA GATGTAAAAA AATATAAAGA GCGTTTAACC
ACCGCGCAAA AAACTACCGG TGAAACCGAT GCGCTAGTGG CAATGAAAGG GCAGCTTAAA
GGCATGCCTA TTGTTGCCAG TGCATTTGAA TTTGCGTTTC ACGGTGGCTC TATGGGCTAT
GCCGTAGGTG AGCGTTTCAC GCGTGCGGCT CAAGTGGCGC TAGAAAACCG TATACCTTAT
GTTTGTTTTT CTGCTACTGG TGGCGCGCGC ATGCAAGAAG CGCTTATATC GCTAATGCAG
ATGGCAAAAA CCAGCGCAGT AATTGAGCGT CTTAAGCAAG AAGGTATACC GTTTATATCT
GTAATGACAG ACCCAGTATA TGGTGGCGTA TCAGCCAGCT TGGCTTTGTT AGGCGATATA
AACGCAGCTG AGCCAGGTGC GCGAGCTGGT TTTGCTGGCC CTAATATTAT TGAGCAAACT
ATTCGTCAGA AATTGCCAAA GGGTTTTCAA CGCAGTGAAT TCCTGTTGGA GCATGGCGCT
ATCGATATGA TTATTCATCG TGCAGAAATG CGCGATCGTG TTGGCTCCTT ACTTGCTAAA
TTTACTAATC AGGCGCCTCT CTAA
 
Protein sequence
MSWLDKIVPS VVRSDGPRSA SKVPEGLWKK CPKCAAVLYR PELESNLDVC PKCDHHMRIG 
ARRRLDIFLD KDDREELATD VLPVDRLKFK DVKKYKERLT TAQKTTGETD ALVAMKGQLK
GMPIVASAFE FAFHGGSMGY AVGERFTRAA QVALENRIPY VCFSATGGAR MQEALISLMQ
MAKTSAVIER LKQEGIPFIS VMTDPVYGGV SASLALLGDI NAAEPGARAG FAGPNIIEQT
IRQKLPKGFQ RSEFLLEHGA IDMIIHRAEM RDRVGSLLAK FTNQAPL