| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2067 |
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| Symbol | |
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| ID | 3967451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2645269 |
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| End bp | 2647320 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921157 |
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| Product | hypothetical protein |
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| Protein accession | YP_527539 |
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| Protein GI | 90021712 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.312074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.672104 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTAGCC AAATAGCCAT TGTTAAAAAC CAAATATCTC GCGACGCATT AGCGTGGTGC
TTGGCAGCAC AAAGTATTTG TATTCTACCT TTGTTTTTCT ATTTTCCATT TTGGGTGCCG
ATTTTGTGGT TGGTTGCCGC AGCGTGGCGA GTGCAAATTT ACCGCGGCCA CTGGGGTTAC
CCACCTTCTT TTGTGAAACT TCTTTTAGGG CTTAGTTGTA TTGCTGGGCT TTGGGTTACT
TATCGAGGTG GGTTTGGGGT AGAGCCGGTT GTTGCATTTT TAGTGTGCGC ATTTGTTTTA
AAACTATTAG AAGCGCGCAC TAAAAAAGAT GTGGTTATCG TTTTATACGT TTGTTTTGTG
GCTGTAGCTG CCCAGTTACT TTTTAATCAA ACTATTATTG CCGCTTTCTA TGCCATTATT
TCGTTAGTTG TAATAATTGC AGCATTTACT GCAGTGTTTA GCCTTGTGGC AAACCGTATT
AAACACAGGC TTTTTTATGC CAGCAAATTA ACCTTGCAGG CGCTACCTTT AGCCGTTGTG
TTATTTCTTG TGTTGCCAAG GTTGGGGCAG TTATGGGCGG TGCCATTAAA TAATGCTAGT
GGCACAACTG GGTTCAGTGA CTCGATGGCC CCTGGTGATA TTAGCAATTT GATTCGCTCA
AGCGCGGTCG CTTTTCGTGC TTCGTTTACT AGTAGTAACG AAGATGTTGC CGAACCTGTT
ATACCCAAAC AGCAAGATTT ATATTGGCGC GGTTTAGTGC TGGAAGATTA CGACGGTCGC
CGTTGGAAGC GAAACCGGTA TCAGCAGGCT GCAGATTTCG CAAGATCCTC AAACAAAGAG
GTAACGAGTG AGGTTGTAAC CGCAGGCGAA TATGTAGAAT ATTCTATTTT AATGGAACCC
CACCAGCAGC GTTGGTTGTT TACCCTTATG GCTCCAGAGG TGCTATTAAA TAGCACGGTA
AGTATAGGTT TTAAACCTCA GGCATTGCTT TCCGCTAATC TACCAGTAAC TCAGCGTATT
CAATACCAAA TCCGATCCGC TCAAAAATAT AGTTTTCAAA CAGAAGGCTT AAGGCGGGAT
GAGCTTAAAC GATCTCTTCA GGTGCCGGAT GAGCTAAACC CTCGAACTAA AGAATTGGTT
GAAAGTTGGT TGGCAAGTGG GTTAACTCAG CAACAAATTA TAGAAAAAGC CCTGGATTTA
TATAGAGAAA GTTTTTACTA CACGTTAAAC CCACCGCCAT TAGGCAGTGA TGCGATTGAT
GAGTTTTTGT TTATAACGCG CCGTGGTTTT TGTGAGCATT TTAGTAGTAG CTTTACCTAT
ATGATGCGCT TGGCCAATAT TCCCGCGCGC GTAGTGGTTG GTTATCAGGG GGGCGAGCAA
AATAGCATAG AAAACTATTT ACTTGTGCGG CAATCAGATG CGCACGCGTG GGCTGAGGTT
TGGTTAGAAG GGAAAGGCTG GCAGCGAATT GACCCCACCC ATGTGGTCGC TCCAAATCGT
ATAGAGCAAG GCCTTTTTAA TTCTGTAGAA GAAAGTGAGG CCGCGCAACT TGAGGGCCGC
TTTGTTAAGC AGTTTGCGCT ATTGAATAGA CTGCAAATGC GATGGGATTC TATAAATTAC
TTATGGCATT CTCAGGTTTT GGCCTACGAC AGCAATGCTC AAAAAAGTTT GTTTAAGCGC
TTATTGGGTG GCACGGAATA TTGGCGTATA GCCCTAGCAC TATTTGGCAG TGTGGCAGTG
TTGTTATGTA TGTATTTTAT TGCTCCCATG CTGCAAAAGG GGGCTAGTCA GCCTGCGGAA
GTGAAGCTGT TCAATATCTT TGAAAAAAAG CTTTGTAAAT TGGGGTATAC ACGTTTAAAA
GGTGAGACTG CGGCGCAATT TGTTGAGCGC ATTGCAAAGG CTAACCCCGA GTTGGCCGAT
CCATTGCTCA AAGTGCGGGA TTCATTTTAT GCTGCGGCCT ATCAAAGCTC GGCAGAAAAT
ATCGCTGTTG GAGTGAAGCG GCTTGCAGCA GTGCTGAAGG TATTTCCCTA CAGTAAGGTG
AGCCCGCCAT AA
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| Protein sequence | MTSQIAIVKN QISRDALAWC LAAQSICILP LFFYFPFWVP ILWLVAAAWR VQIYRGHWGY
PPSFVKLLLG LSCIAGLWVT YRGGFGVEPV VAFLVCAFVL KLLEARTKKD VVIVLYVCFV
AVAAQLLFNQ TIIAAFYAII SLVVIIAAFT AVFSLVANRI KHRLFYASKL TLQALPLAVV
LFLVLPRLGQ LWAVPLNNAS GTTGFSDSMA PGDISNLIRS SAVAFRASFT SSNEDVAEPV
IPKQQDLYWR GLVLEDYDGR RWKRNRYQQA ADFARSSNKE VTSEVVTAGE YVEYSILMEP
HQQRWLFTLM APEVLLNSTV SIGFKPQALL SANLPVTQRI QYQIRSAQKY SFQTEGLRRD
ELKRSLQVPD ELNPRTKELV ESWLASGLTQ QQIIEKALDL YRESFYYTLN PPPLGSDAID
EFLFITRRGF CEHFSSSFTY MMRLANIPAR VVVGYQGGEQ NSIENYLLVR QSDAHAWAEV
WLEGKGWQRI DPTHVVAPNR IEQGLFNSVE ESEAAQLEGR FVKQFALLNR LQMRWDSINY
LWHSQVLAYD SNAQKSLFKR LLGGTEYWRI ALALFGSVAV LLCMYFIAPM LQKGASQPAE
VKLFNIFEKK LCKLGYTRLK GETAAQFVER IAKANPELAD PLLKVRDSFY AAAYQSSAEN
IAVGVKRLAA VLKVFPYSKV SPP
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