Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_2054 |
Symbol | |
ID | 3967438 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2634389 |
End bp | 2634985 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637921144 |
Product | response regulator receiver domain-containing protein |
Protein accession | YP_527526 |
Protein GI | 90021699 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.595634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCAAAA TACTAGTAGC TGACGATCAC GACTTAGTGC GCATGGGTAT AGTGCGCATG TTGAGTGACG TCGAAGGCAT AGAGGTGGTA GGTGAAGCCT GTAATGGCGA AGATGCCGTA CGCCTCGCCA GAGAATTGGC GCCAGACGTT ATTCTAATGG ACGTAAAAAT GCCTGGTATG GGCGGCTTAG AAGCAACGCG AAAAATTCAT CAGGCGTGTA GTGGCTGTAA AATTATTGCT GTTACCGCTT TGTCAGACGA CCTGTTTCCA GAGCGCCTTA TGAAGGCGGG CGCCGCAGGT TATGTTACCA AGGGTGCCGG TTTCGAAGAG ATAGTAAACG CCATTCGCAC AGTGTTGAAC GGGGACCTCT ATATGAGCTC TAGCATTGCG CAGCAGTTAG CCTTGCGTAA TTTTGGTTCT TCTAAAGGCT CTGCATCACC ATTTGAGCAG TTATCCGAGC GCGAGCTGCA AACGGCTATA ATGATTGCGA ACAGTAAAAA GGTGCACGAA ATAGCAGAGG CATTTTGTGT AAGTCCTAAA CGGTCAATAG TTACCGCTAC CGCATATTCG ATAAGCTCAA AATCAACAGT GATGTAG
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Protein sequence | MTKILVADDH DLVRMGIVRM LSDVEGIEVV GEACNGEDAV RLARELAPDV ILMDVKMPGM GGLEATRKIH QACSGCKIIA VTALSDDLFP ERLMKAGAAG YVTKGAGFEE IVNAIRTVLN GDLYMSSSIA QQLALRNFGS SKGSASPFEQ LSERELQTAI MIANSKKVHE IAEAFCVSPK RSIVTATAYS ISSKSTVM
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