| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2052 |
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| Symbol | |
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| ID | 3967412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2631832 |
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| End bp | 2632389 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921141 |
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| Product | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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| Protein accession | YP_527524 |
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| Protein GI | 90021697 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
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| TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.211548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.621229 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCAACA TAGCTAACCA ACTTACCCTA GGCCGAATAC TGTTTATCCC TCTCTTAGTG
GTTGTGTATT ACTCACCGCT AGAATGGAAA TACTGGTATA GCGCAGCCTT ATTTGGGCTT
GCCGGCATAA CAGACTGGCT AGATGGCTAC ATAGCACGTA AATACGGTAT GGATACCCCC
TTTGGCGCCT TCTTAGACCC AGTAGCCGAC AAGCTAATGG TTGCCGTTGC GCTGGCCGTG
CTAATAGAGG CGCACGCCGA TGTTTGGTTT ACATTGCCTG CCACAGTTAT TATTGGTCGT
GAGATAGTTA TATCTGCACT AAGAGAGTGG ATGGCCGAAT TGGGCGCTAG AGCTAAAGTT
GGTGTGTCTA TGATAGGAAA GGTAAAAACA ACGCTACAAA TTATTGCTAT TGTGCTGCTT
TTAGCGTTTA ATCCCGCCTC CTATCCGTTG TTCAATAAAG TTGGTTATAT AACGCTCTAT
GTGGCGGCAA TACTTACTCT TTGGTCAATG ATAGTGTACC TGCGGGCGGC ATGGCCGAGC
CTAAAGGGTG CAAAATAA
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| Protein sequence | MFNIANQLTL GRILFIPLLV VVYYSPLEWK YWYSAALFGL AGITDWLDGY IARKYGMDTP
FGAFLDPVAD KLMVAVALAV LIEAHADVWF TLPATVIIGR EIVISALREW MAELGARAKV
GVSMIGKVKT TLQIIAIVLL LAFNPASYPL FNKVGYITLY VAAILTLWSM IVYLRAAWPS
LKGAK
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