| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2031 |
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| Symbol | |
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| ID | 3967294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2559095 |
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| End bp | 2560714 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637921119 |
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| Product | ABC transporter ATP-binding protein |
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| Protein accession | YP_527503 |
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| Protein GI | 90021676 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00115375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACC TAATAGTTAA AAATTTAACC ACCCACTTTT ATACACGCGA AGGTTTAACC
ACCGCTGTAG ATAACGTTAG CTTTACCCTA GAAGCGGGCC AAATACTTGG CATAGTTGGC
GAATCCGGCT CGGGTAAATC TGTTGCTTGC TACAGTTTGC TAGGTTTAAT TCCTAGCCCA
CCGGGCAAAG TGGTTAATGG CAGCGCTCTG TTTAACGGCG AAGACCTTCT TACTAAAACA
GAAGCGGAAT TACGCAGTGT GCGCGGCAGA AAAATTAGCA TGATTTTTCA AGACCCTATG
ACCTCCCTCA ACCCGCACAT GCGTATAGGT GATCAACTAA TAGAAGCCTA TCGCTTGCAC
CACAAAAGCA CTAAAAAACA GGCAACCGAA AAGGCGATAC AGCTTCTACA AGAAGTGGGT
ATTAAAGACG CCGACACACG CATACGTGCC TACCCTCATG AATTTTCTGG CGGTATGCGA
CAGCGCGCCA TGATCGCCAT GGCTTTGATT ACCGAGCCAG AATTATTAAT AGCCGACGAA
CCAACAACTG CACTGGACGT AACCGTACAA GCGCAAATTC TACAGTTGAT TAAATCGATC
CAGCAGAAGC GACACCTAAG TGTCATTTTT ATTTCGCACG ACTTAGCTGT AGTTTCACAA
ATTGCCGACC AGCTTATCGT TATGAAAGAA GGTAAGGTGG TAGAAAGCGG TGCAACTGCG
AGCGTTTTTA GCGAGCAAAA GCACCCTTAT ACAAAAAAAT TAATTGCTGC TATTCCCAAT
AAAGCCAAGC AGGTTAAATA TACCGCTACC GAAACCAACC CTTTGTTAAC GGTTAATAAT
CTTTCCACCA GCTTCGCGCA AGAAACCACC AGTTGGTTTG GCAAAAAGGC CGCCCGTAAG
GTAGTGGTAA AAGATATTAG CTTTTCAATT CAGCAAGGCG AAATACTCGG GTTAGTTGGT
GAGTCTGGCT CGGGTAAATC TACCCTTGGT CGCAGTGTTA TTAAATTAAT TAACGCCGAT
AACGGCGAAA TAAACATAGA CCAACATTGC ATTCACACCT TGCAAGGTGA CAAGCTAAAA
CAAGCCCGCA AAGATTTTCA AATGATCTTT CAAGACCCGT ACGCGTCGCT TAACCCAAGG
TTAACGGTAT TTGACGCGCT GGCAGAACCG CTGCTTTTGC ACGGCATTGC CAACAAAACC
AATGTGGTGG AGAAAGTTAA CACCTTAATG GATGACGTAG GCCTTGCCCG TAAGTTTGTG
CGCAAATACC CCCATGAGTT TTCTGGTGGC CAGCGCCAGC GTATAGCCAT AGCTCGCGCC
TTAGCCCCAC AACCAAAGCT CATAATTGCC GATGAGCCCG TATCGGCGTT GGATGTAACC
ATCCAAGCAC AAATATTAGA GCTACTGCTT AACCTTACTC AAAAGCACTG CCTCGCTATG
TTATTTATTT CGCACGATTT AGCCGTTGTG CGCTACCTGT GCGACCGAGT AATGGTTATG
CACAACGGCA ACCTTGTAGA GCAAGGGCCT ACCGAAGACA TTTATAACCA GCCCACTCAC
CCTTATACCC AAACGTTAAT TAGCGCGATT CCAACTTTTA TGACACAAAA TATGCACTAA
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| Protein sequence | MSHLIVKNLT THFYTREGLT TAVDNVSFTL EAGQILGIVG ESGSGKSVAC YSLLGLIPSP
PGKVVNGSAL FNGEDLLTKT EAELRSVRGR KISMIFQDPM TSLNPHMRIG DQLIEAYRLH
HKSTKKQATE KAIQLLQEVG IKDADTRIRA YPHEFSGGMR QRAMIAMALI TEPELLIADE
PTTALDVTVQ AQILQLIKSI QQKRHLSVIF ISHDLAVVSQ IADQLIVMKE GKVVESGATA
SVFSEQKHPY TKKLIAAIPN KAKQVKYTAT ETNPLLTVNN LSTSFAQETT SWFGKKAARK
VVVKDISFSI QQGEILGLVG ESGSGKSTLG RSVIKLINAD NGEINIDQHC IHTLQGDKLK
QARKDFQMIF QDPYASLNPR LTVFDALAEP LLLHGIANKT NVVEKVNTLM DDVGLARKFV
RKYPHEFSGG QRQRIAIARA LAPQPKLIIA DEPVSALDVT IQAQILELLL NLTQKHCLAM
LFISHDLAVV RYLCDRVMVM HNGNLVEQGP TEDIYNQPTH PYTQTLISAI PTFMTQNMH
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