| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1994 |
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| Symbol | |
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| ID | 3967237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2508503 |
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| End bp | 2510614 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637921082 |
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| Product | C-terminal processing peptidase-1 |
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| Protein accession | YP_527466 |
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| Protein GI | 90021639 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.754178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAGA ATATTGCCGT AAGCCTCGTT TTTATTTTCT CTGTCACCTG CGCTGTAGCT
AAACCACCAG AAGCGCCTAA GCTGATTCCT ACAAAAGTAC AATCGCAAAC CATTGTTGAC
GTAATAGCTC AGTTAAATGC GAGACATTAT CGCAACCAAG CAATTGACGA TTCCTTGTCT
ACGCGATTCC TAGAAAGCTA TATCGACAGC CTCGACCCTG CCCATATGTT TTTCTACACA
AAAGATGTAG AAAACTTCAA AAAGCACAAC CTTAAATACG ATGATTATTT CCGTAAGGGC
AAGCTAGAAG AAGGTTTTGA GGTGTATAGA ACCTACCGCG CCCGTGTTGT TTCGCGCTTA
GAGTCTGCTA TAGAGATGCT GGCCGACGAA AATGTTAAGT TTGACTTTAA CGCTAAAGAC
GAAATTATAT TAGATCGCTC TGAATTGCCT TGGCCAACCA CCCAAGCCGA AGCCGACGAG
CTTTGGTACA AGCGCACAAA ATTAAGCCTG CTTAACTTAA AACTAGCAGG TAAAACCTTA
GAAGAAGCCA AAGAAACGGT TACAAAGCGC TATAAAAACC AGCTCAATCG CATATTGCAG
CAAGATAGCG CCGATGTATT TGAAATAATG GTGAATTCAT TAACGCTGCT ATTTGACCCG
CATACAAATT ATTGGTCGCC GCGCACTTCC GAGAACTTCA ACATTAATAT GTCGCTTTCT
TTAGAGGGCA TCGGTGCGGT ATTACAATCT GAAGATGAAT TCACCAAGGT AGTAAGCCTA
GTGCCTGGCG GCCCTGCTTC GAAGCAAGGC CAATTAAAGC CAGCCGATAG AATTGTTGGT
GTTGGCCAAG GCGACGAAGG TGAAGTTGTC GATGTTACAG GTTGGCGATT AGATGAAGTT
GTAGACCGTA TTCGCGGCCC TAAGAACACA GTTGTGCGCC TAGAAGTGTT GCCCGCTAAA
GAAAGCAATG GCGAAACTGC GGTAATTCGT ATTAAACGCG ATGAGGTTAA ACTAGAAGAC
CAAGCCGCTA AAAAAGGCGT ATTGGAGCTA AGTGATGAAG AGCGCCTATA CAAAATTGGT
GTCATTAACC TGCCTGCTTT TTATATTAAC TTCGATAAAG CAAATAGTCG CGACCCAGAC
TATCGCAGTA GTACCCGCGA TGTATCTCGC CTACTAGACG AGCTACAAGC AGAAGGCGTA
GACGGTATTA TTTTAGATTT ACGCAACAAT GGCGGCGGTT CACTGCGCGA AGCAACCATG
CTTACCGATT TGTTTATCGA CCACGGTACC GTTGTGCAGA TTCGTACTCC AGATGGCTAC
ATAGCTCGCC ATAACCACGC CCGTTTACGT GCTAAATATC GCGGCCCGCT AATCGTGCTT
GTAAATCGAT TAAGTGCATC GGCTTCAGAA ATTTTTGCCG GCGCAATTCA GGATTACGAC
AGAGGGCTAA TTGTAGGCAC TCAAACTTTT GGTAAGGGTA CGGTGCAATC TGTGGCCCCT
ACTGTTGAAG GCAAAATTAA ATTAACTGAA TCAAAATTCT ACCGCGTTTC TGGCGATAGC
ACCCAGCATC GAGGCATCAT TCCAGATATC GAGCTACCTA TGCTAGTGGA TATGAAGGAA
GTGGGCGAAT CCGCTTACGA CAATGCCCTG CCGTGGGACA CTATCCACCC AGTACCACAT
GCAAAATACT TTGATCTTGA TGCGAGCATT CCCTACCTAA CCGAAGCCCA TAAAAAGCGT
ATTGCTCATG ACCCAGACTT TAACTACCTG CTCGATCAAA TAGCTGTAAT GGAAGAGAAC
AAGCGTAAAA AAGCAGTATC TCTTAACGAA AAACAGCGAA TTGCAGAGAA AGAAAACCTA
GAAAAACAAG CGATGGTTAT CGAGAACAAG CGTCGCACCG GCAAAGGTCA AGACCCGTAC
AAAACGTTAG CTGAGTACCG AGCCGCGCAA GAAGAAGAAA ACCCGGAGGA CGCTCCTGTA
GTATCCTCTC GTGAAACAGT CATCGATTTA GATGGCGATA CCCTATTGAA CGAATCTGGC
AACATATTAA TTGACTACAT TCGTTTTCAA ACTACAAACG CTCAAAAACA GGCTTCAAAC
TTTAGCAAAT GA
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| Protein sequence | MIKNIAVSLV FIFSVTCAVA KPPEAPKLIP TKVQSQTIVD VIAQLNARHY RNQAIDDSLS
TRFLESYIDS LDPAHMFFYT KDVENFKKHN LKYDDYFRKG KLEEGFEVYR TYRARVVSRL
ESAIEMLADE NVKFDFNAKD EIILDRSELP WPTTQAEADE LWYKRTKLSL LNLKLAGKTL
EEAKETVTKR YKNQLNRILQ QDSADVFEIM VNSLTLLFDP HTNYWSPRTS ENFNINMSLS
LEGIGAVLQS EDEFTKVVSL VPGGPASKQG QLKPADRIVG VGQGDEGEVV DVTGWRLDEV
VDRIRGPKNT VVRLEVLPAK ESNGETAVIR IKRDEVKLED QAAKKGVLEL SDEERLYKIG
VINLPAFYIN FDKANSRDPD YRSSTRDVSR LLDELQAEGV DGIILDLRNN GGGSLREATM
LTDLFIDHGT VVQIRTPDGY IARHNHARLR AKYRGPLIVL VNRLSASASE IFAGAIQDYD
RGLIVGTQTF GKGTVQSVAP TVEGKIKLTE SKFYRVSGDS TQHRGIIPDI ELPMLVDMKE
VGESAYDNAL PWDTIHPVPH AKYFDLDASI PYLTEAHKKR IAHDPDFNYL LDQIAVMEEN
KRKKAVSLNE KQRIAEKENL EKQAMVIENK RRTGKGQDPY KTLAEYRAAQ EEENPEDAPV
VSSRETVIDL DGDTLLNESG NILIDYIRFQ TTNAQKQASN FSK
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