| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1981 |
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| Symbol | |
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| ID | 3967224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2492106 |
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| End bp | 2492681 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637921069 |
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| Product | ABC transporter permease |
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| Protein accession | YP_527453 |
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| Protein GI | 90021626 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.328917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGT CTGCAAGTAT CTACGACCTT CTTGAAGAAA TAGATAACGC AACCGAAGGC
GATTTAACCC TAGGAGACGT TACAGACTCG CTAAAATCTC AGGGCTTTGG CCCATTAATA
TTTATAGTGG CCGTTGCAGC AATACTGCCT ACCGGTGCCA TTCCCATGGT GCCAACCTTA
TGCGCAGTAG TAATTTCTAT ATTTTCTATT CAACTGCTTT TTGGTGCCTC TGGGCCTTGG
CTACCAAAAT TTTTACGTGA TAGAAGCATT AAACGCAGCA CTTTCACTAA AGCCAAGCAA
AAAGCACAGG GGTTTGCGAA AAAACTCGAT AAGCTTATTA GCAAGCGCCA CGAACACCTA
TTTACGCAAT TTTCGATAAA GTTAACAGCC GTTTGCATGC TGTTTCTTTC TTTTGTAATC
CCCCCCATGG AGATAATGCC ATTTCTAGCG GCATTGCCAG CAACCGCAAT TGCGTTGTTT
GCACTAGCGC TAATAGCAAG GGATGGCATT ATTTTCGTAG CTGCCTATGT GTTGGCTGCA
ACCGCAGTAG CCATAACGCT ATACACCAAT ATTTAG
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| Protein sequence | MSESASIYDL LEEIDNATEG DLTLGDVTDS LKSQGFGPLI FIVAVAAILP TGAIPMVPTL
CAVVISIFSI QLLFGASGPW LPKFLRDRSI KRSTFTKAKQ KAQGFAKKLD KLISKRHEHL
FTQFSIKLTA VCMLFLSFVI PPMEIMPFLA ALPATAIALF ALALIARDGI IFVAAYVLAA
TAVAITLYTN I
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