Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1944 |
Symbol | |
ID | 3967050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2446179 |
End bp | 2446754 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637921032 |
Product | cytochrome c family protein |
Protein accession | YP_527416 |
Protein GI | 90021589 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.731433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTATCAA TTTCAGCATT TTTTAAGAGT TTCCTGCTCA TTGTGATTAC AGCCCTCCTT GCAGGAGGGC TGTTTATTTA TTCGGGGCTT TATCCAATTG GCGCAGATAC ACAACATTCT CCCATTACTT ATTGGTTGTT AGAAACACTG CGTGAAAAAT CCATCGCTCG TGATGCAAAG GATGTTGAAA TCCCAACAGA CCTGGAATTC TCTGACCGAC TATTAGCTGG TGGAGCCGAT TACAATGACA TGTGCACAGG ATGTCACTTG AAGCCGGGTA AAATAGAAAG TGATTTTACC ATCGGCTTGT ACCCCTCTCC TCCAAATTTG AGCATCTCTG CCGACGGGCA TAAGCACAGT CATGACGATT CTTCAGGAGA CGATGCCATC AAGAGACAAT TCTGGATCAT TAAACACGGC ATAAAAGCGT CTGGCATGCC AGCGTGGGGA CCTACGCACA GCGATGAACG AATCTGGAAT ATGGTGGCCT TTTTACAGAA GCTTCCAAGC TTATCAAAAG CGCAATATCA AATATTGACC GCGAGAGACG ACGCTGACGA TACGCACAAA CATTGA
|
Protein sequence | MLSISAFFKS FLLIVITALL AGGLFIYSGL YPIGADTQHS PITYWLLETL REKSIARDAK DVEIPTDLEF SDRLLAGGAD YNDMCTGCHL KPGKIESDFT IGLYPSPPNL SISADGHKHS HDDSSGDDAI KRQFWIIKHG IKASGMPAWG PTHSDERIWN MVAFLQKLPS LSKAQYQILT ARDDADDTHK H
|
| |