Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1931 |
Symbol | |
ID | 3967018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2433673 |
End bp | 2436792 |
Gene Length | 3120 bp |
Protein Length | 1039 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637921019 |
Product | Co/Zn/Cd efflux system membrane component |
Protein accession | YP_527403 |
Protein GI | 90021576 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.412028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAT CTATTATTCG CTGGTCGATT GGTAATCGGT TTTTAGTGCT GTTGGCAACA ATGATTCTGA TTGGGGTAGG CCTCTATTCA CTAAAGCAAA CACCCGTCGA TGCTATCCCA GATTTAAGTG ATGTGCAGGT CATTATTAAA ACCTCTTACC CAGGCCAAGC ACCTCAAGTG GTGGAAGACC AAGTCACCTA TCCACTGACT ACGGCGATGT TATCGGTACC GGGCGCCGTC ACTGTGCGTG GCTACTCCTT TTTTGGGGAC AGTTATGTCT ATGTCATTTT TGATGAAGAT ACCGATTTGT ACTGGGCCCG AAGTCGAGTT CTCGAATATC TAAGTCAAGT CGCTCCCACT TTGCCGGCAG CGGCGAAGCC CCAGCTCGGG CCAGATGCCA CGGGTGTCGG TTGGGTTTAT ATTTATTCGC TCATTGATCG CTCCGGTCAA CACGATATTA GCCAACTTCG CAGCCTCCAG GATTGGTTTT TAAAATACGA ATTGCAAACC GTACCGGGTG TTTCTGAAGT GGCTGCGGTA GGGGGCATGG TGAAGCAATA TCAAGTCACG GTAAGTCCTG AGAAGCTGCG CGCATTTAAT ATACCCCTGG CGCACATACA AATGGCGATC AAGCAAGCGA ATCAAGAAGT AGGGGCCTCC GTAGTGGAGA TGGCGGAAGC TGAATATATG GTGCGCGCTT CTGGATATAT TCAAAACGAG GCGGATCTCG CAAACATTCC CCTTGGTGTA AATTCAAACG GCACGCCATT GCTGCTAAAA GATGTGGCCG ATATCGGTAT CGGTCCACAA ATGCGACGTG GTATTGCAGA ATTAAATGGA GAAGGGGAAA CCGTTGGAGG TGTTGTTGTG ATGCGATTTG GTGAAAATGC GCAAACAACA ATCAATGGCG TAAAAGCAAA ATTAGAACAG TTACAGGCAG GTCTGCCAGA GGGCGTAGAG GTTGTCACCG TTTATGATCG CTCAGGATTG ATTGAGCGAG CGGTCGAAAA CCTTTGGCAC AAACTCTTGG AGGAGTTTGT CGTCGTAGCG TTGGTTTGCA TGATTTTCCT TTTTCATGTT CGCTCATCCT TGGTGGCAAT TGTCAGTTTG CCGGTGGGAA TATTAACGGC ATTTATCATC ATGCACGTGC AGGGTATTAA TGCCAACATT ATGTCATTGG GTGGTATTGC AATCGCTATT GGGGCCATGA TTGATGGTGC GATTGTGATG ATTGAGAATA TGCATAAACA TATGGAGCAT ACCCCAATCA CCAAAGAAAA TCGCTGGCAA ATTGTCACCG AATCCGCTGT TGAAGTGGGT CCTGCTTTAT TTTTCAGTTT GTTGATTATC ACGGTGAGTT TTGTACCCGT ATTCACACTG GAAGCACAAG AGGGTCGTAT GTTTAGCCCG CTTGCCTTTA CTAAAACCTA TGCGATGGCC GCTTCGGCAG CACTGGCTAT TACTTTGGTG CCGGTATTAA TGGGTTATTT TATTCGAGGC AAAGTATTGC CCGAGCACAA GAATCCAGTA AACCAATTTT TGATTGCCAG CTATATGCCA GCGTTAAAAG GCGTCCTTAA ATTTCCCAAA ATCACCATTC TATGTGCCGT GATTGTATTG GCTTCCGTTT ATTGGCCGTT GCAAAAAATC GGTAGTGAAT TTATTCCACC GTTGGATGAA GGCGATTTGA TGTACATGCC TACAACATAC CCAGGGATTT CGATAGGCAA GGCGAGAGAA TTATTACAGC AAACCGATAA ATTGATTGCC TCGGTTCCAG AAGTGGAAAA CGTATTTGGC AAAATTGGAC GTGCCGATAC GGCAACGGAC CCTGCGCCAT TGACGATGAT AGAAACCTTT ATTCAACTCA AACCTCGTGA CCAATGGCGA GAGGGTGTGA CAACTGAAAG CCTTAAGAAG GAGCTTGACG CCTTGGTTAA ACTTCCTGGC GTCACTAATG CCTGGGTTAT GCCCATTAAA ACACGCATTG ATATGTTGGC GACCGGCATC AAAACACCCG TGGGCATAAA AGTCGCCGGG CCCGATTTGT CAGTAATTCA GGATTTAGGC AAGCAGCTTG AAAACCTTCT TAAAGATGTT GAAGGCACTG CATCCGTGTA TTCGGAACGC GTCGCTGGCG GTCGGTATTT GAATATTGAT ATTGATCGAG CAAAAGCTGC GCGTTACGGT TTGAATATCG CGGATGTGCA ACAAGTGATT GCGTCTGCAG TGGGAGGAAT GAATGTCACC CAAACCGTGG AAGGACTGGA GCGCTACCCG GTAAATATTC GTTATCCGCA AGCCTATCGC GATTCGCCAG CGCAATTAGC GCTACTGCCA ATCGTGACTC CCAAAGGCGA ACGCATCGCT CTGGGCGATG TTGCCAAAGT CAGTATTGCT GATGGACCGC CTGGCATCAA AAGTGAAAAC GCGAGAATTA ACGGTTGGAC TTTTGTCGAT ATCGATGGCG TGGATGTGGG TACCTATGTG GAGAACGCAA AAGAAATCGT AGCGAAACAA TTGGAGCTTC CTGCCGGGTA CTCGATTGGC TGGTCCGGTC AATATGAGTA CATGGTTCGC GCAAAAGAAA AATTGCAGTA TGTGGTGCCA TTAACCTTAG CCATCATTGC CATTTTACTT TTTTTGAACT TCAGAAATTT TGCACACGTG GCCATTATTC TAGGCTCTCT GCCCTTGGCC TTGGTCGGGT CAATCTGGCT GATATACCTA CTCGGCTTTA ATTTCTCGGT CGCCGTTGGT GTGGGCTTTA TTGCTCTGGC GGGTGTCGCG ACCGAGCTCT CCGTGATCAT GCTGGTGTTT CTAGAAATAT GTTGGCGTCA ACATATTAAA CGTGCACAAG AGGAGGGTCG CAAGACCAAC AGTGATGACC TGCACCAAGC GATTATCGAA GGCGGAGCGC TTCGAGTTCG ACCTAAAGTC ATGACCGCCT CAGCCATTAT CATCGGTTTA CTGCCGATCA TGTATGGCAG TGGCACCGGA TCAGAGGTGA TGAGTCGCAT TGCAGCCCCA ATGGTTGGCG GTATGCTCAG CGCATTGGTA TTGACCCTGT TGGTGCTGCC CGCCGTGTAT TTGCTCTGGA AGCGAGCAAC GATCGATTAG
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Protein sequence | MIESIIRWSI GNRFLVLLAT MILIGVGLYS LKQTPVDAIP DLSDVQVIIK TSYPGQAPQV VEDQVTYPLT TAMLSVPGAV TVRGYSFFGD SYVYVIFDED TDLYWARSRV LEYLSQVAPT LPAAAKPQLG PDATGVGWVY IYSLIDRSGQ HDISQLRSLQ DWFLKYELQT VPGVSEVAAV GGMVKQYQVT VSPEKLRAFN IPLAHIQMAI KQANQEVGAS VVEMAEAEYM VRASGYIQNE ADLANIPLGV NSNGTPLLLK DVADIGIGPQ MRRGIAELNG EGETVGGVVV MRFGENAQTT INGVKAKLEQ LQAGLPEGVE VVTVYDRSGL IERAVENLWH KLLEEFVVVA LVCMIFLFHV RSSLVAIVSL PVGILTAFII MHVQGINANI MSLGGIAIAI GAMIDGAIVM IENMHKHMEH TPITKENRWQ IVTESAVEVG PALFFSLLII TVSFVPVFTL EAQEGRMFSP LAFTKTYAMA ASAALAITLV PVLMGYFIRG KVLPEHKNPV NQFLIASYMP ALKGVLKFPK ITILCAVIVL ASVYWPLQKI GSEFIPPLDE GDLMYMPTTY PGISIGKARE LLQQTDKLIA SVPEVENVFG KIGRADTATD PAPLTMIETF IQLKPRDQWR EGVTTESLKK ELDALVKLPG VTNAWVMPIK TRIDMLATGI KTPVGIKVAG PDLSVIQDLG KQLENLLKDV EGTASVYSER VAGGRYLNID IDRAKAARYG LNIADVQQVI ASAVGGMNVT QTVEGLERYP VNIRYPQAYR DSPAQLALLP IVTPKGERIA LGDVAKVSIA DGPPGIKSEN ARINGWTFVD IDGVDVGTYV ENAKEIVAKQ LELPAGYSIG WSGQYEYMVR AKEKLQYVVP LTLAIIAILL FLNFRNFAHV AIILGSLPLA LVGSIWLIYL LGFNFSVAVG VGFIALAGVA TELSVIMLVF LEICWRQHIK RAQEEGRKTN SDDLHQAIIE GGALRVRPKV MTASAIIIGL LPIMYGSGTG SEVMSRIAAP MVGGMLSALV LTLLVLPAVY LLWKRATID
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