Gene Sde_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1913 
Symbol 
ID3966977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2414402 
End bp2415193 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content39% 
IMG OID637920998 
Producthypothetical protein 
Protein accessionYP_527385 
Protein GI90021558 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TTAAGGTTAT TGGAATACTA CTACTTATAA TTGTTGGTCT GTTAGCGGCT 
GGCGGTTATT ACTTGTATAG CAATCTTAAC AGCTTGGTAA AAGAAGGCGT TGAAACCGTT
GGGCCACAAG TTACCGGTAC CAATGTAAAT TTAAATAGCG TAGATATCGC CCTAAAAGAT
GCGCGTGCTC AGTTTAAGGG GTTCTCGGTG GCTAACCCAG CGGGTTTCAC CACTGACAAT
GCATTTAGTT TTGAGGATAT CGTATTCGAT ATTGATCCCA GTTCGCTGCA AACCGATGTA
ATTGTTATTG ATGAAATGCG CATTTCAGGT GTAAGCATTA CCGCAGAACA AAAAGGCTTG
GATTCAAACC TGCAAGCACT ACTTCGACAA ATAAATGAAA ACGTGGGTGG GGGCTCTACG
CAACAAGAGC AGGCCGCTGA AGAAAGCGCA GGCAAAGAAA TTAAACTAGC TATTAAAAAA
CTTGTCTTTA GCGATAACAA AGTAAATTTA GTTACCGAAA AGTACGGTGA TTATGTGCTA
GAAATGCCAA TAATAGAGTC TGTAAATTTA GGTAGTGCTT CAAATGGTTT AACCCCTGCG
CAAATGGGTA AAGCCATTGT GGACCCATTA ATAAAACAAG CTAAAAAGAC GGCGGAAAAA
CGCCTGAAAA AATTAGCAGA AGAAAATATT AAAGATAAAG CTGAAGCTAA AATGCAAGAA
AAGCTAGACT CAGCCTTGGA TGATGATGCC AAAGAAAAGT TAGACAAAGT TAAAGGCTTG
TTTGGCAAAT AA
 
Protein sequence
MKAFKVIGIL LLIIVGLLAA GGYYLYSNLN SLVKEGVETV GPQVTGTNVN LNSVDIALKD 
ARAQFKGFSV ANPAGFTTDN AFSFEDIVFD IDPSSLQTDV IVIDEMRISG VSITAEQKGL
DSNLQALLRQ INENVGGGST QQEQAAEESA GKEIKLAIKK LVFSDNKVNL VTEKYGDYVL
EMPIIESVNL GSASNGLTPA QMGKAIVDPL IKQAKKTAEK RLKKLAEENI KDKAEAKMQE
KLDSALDDDA KEKLDKVKGL FGK