Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1852 |
Symbol | |
ID | 3966895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2342927 |
End bp | 2343904 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637920935 |
Product | methyltransferase, putative |
Protein accession | YP_527324 |
Protein GI | 90021497 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
TIGRFAM ID | [TIGR00452] methyltransferase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.670085 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGATT ACACTAGCTT TTTAGAACAA GAAAAAGAAG GCCCGCTAGC TCGTTGGGTA GAAATACTGC CAGACCAAAT TAGCGAAGGC TTATCTACCA AGCGCTACGG CGACCTAGAG CAATGGCTAA CTGCCATGCA GAATTTACCC CAAGTAGACA ACGTACAGGT TAGCTACCAA AGCGCTGTGA CGTTAAAATC TACAGCCCCC TTAGCCCAAG AAACCCATAC ACTTATTGAG CAGCAGTTTC GCGCACTCAT CCCTTGGCGC AAAGGCCCCT ACAATATATT TGATATTGAA ATAGACACCG AATGGCATTC GGACTGGAAG TGGGACCGAG TCCTACCCCA TTTAGCACCA CTCAAACACC GTAAAATTCT AGATGTAGGC TGCGGCAATG GATACCACTG CTGGCGCATG TATGGTGAAG GCGCGAGCCA AGTAATAGGC ATAGACCCAT CGCCGCGCTT TGTTGTGCAG TTTTATATGC TAAAGCACTT TATTGGCAGC AACGCCCCTG TGGACCTATT ACCGGTCCCC ATGGAAGCCG TACCCGCCAA TTTACAAGCT TTTGACACCA CCTTTTCAAT GGGTGTTTTG TATCATCGCC GCTCCCCTAT GGATCACCTA CGCGAACTAA AAGCCACATT GCGCCCAGGC GGTCAATTGG TTTTAGAAAC CTTAGTAATA GAAGGCAAGC TCGGCGAAGT GTTAGTGCCA GAAGGCCGCT ACGCAATGAT GAATAACGTA TGGTTTTTAC CTAGCGTGCC AACACTTATT TCTTGGCTAA CCAAATGTGG CTTTAAAAAT GCCCGCTGCG TAGATGTAAA CCAAACCAGC ACAGACGAGC AACGCTCGAC CGAATGGATG ACCTTTCAAT CGTTAAGCGA CTTCCTAGAC CCTAACGACC CAACCTTAAC CGCAGAAGGC CACCCCGCCC CATTGCGGGC AGTGATACTT GCAGAAGCGC CTGAATAG
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Protein sequence | MIDYTSFLEQ EKEGPLARWV EILPDQISEG LSTKRYGDLE QWLTAMQNLP QVDNVQVSYQ SAVTLKSTAP LAQETHTLIE QQFRALIPWR KGPYNIFDIE IDTEWHSDWK WDRVLPHLAP LKHRKILDVG CGNGYHCWRM YGEGASQVIG IDPSPRFVVQ FYMLKHFIGS NAPVDLLPVP MEAVPANLQA FDTTFSMGVL YHRRSPMDHL RELKATLRPG GQLVLETLVI EGKLGEVLVP EGRYAMMNNV WFLPSVPTLI SWLTKCGFKN ARCVDVNQTS TDEQRSTEWM TFQSLSDFLD PNDPTLTAEG HPAPLRAVIL AEAPE
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