| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1779 |
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| Symbol | |
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| ID | 3966705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2270319 |
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| End bp | 2272232 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920862 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_527251 |
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| Protein GI | 90021424 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000514394 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTTT TAAAGTTAGA CAAGTACCAG CTCCATTATG GCGAGCAGGC CATCTTCGAC
GATTTGAGTT TGAATTTGGA GCCGGGCGAT CGTCTGTGCA TCATTGGGCG CAATGGCGTT
GGCAAATCCA CGCTGCTTAA ATGTATCCAA GGGGATATAG ATCCAGATTC TGGCCAGCGC
TGGTTAAATA CCGGCGTAAA GGTTGCCAGC TTATCGCAAG ATTTACCCGA GGCAGGCGAT
TTAACTGTAT TTGAAATGAT TGCGCAAGCC ATGCCAGAGC TAGGCGCTGA TCTTGCGCAA
TTTGCCAAAC TTGTACAGCA ACCAGATACC GATTTAGAGC TATTGGAGCG CGTGCAACAC
CGCATAGAAG CGGCCGATGG CTGGCGTTTT CAGAACAAAA TAGAGCAGGT GATTACCCGT
TTAGACCTAG ATGGCGAGGC GAAAATGAGC GCGCTGTCGG GTGGCTGGCG CAGGCGAGTC
GCTTTAGCGC AGGCGCTTGT TGTAGAGCCA GATGTACTTT TGCTCGATGA GCCTACCAAC
CACTTGGATA TCGCCGCAAT TCGTTGGTTA GAAGAGCAAC TGCTGAGTTT TGCCGGCGCG
TTGGTGTTTA TTACGCACGA TAGGGCGTTC TTGCGCGCAT TGAGTAACAA AATAGGCGAA
TTAGATCGCG GCCAGCTTTC GACGTGGGAT GGCGATTACG ATTCATTTTT AACCTATCGC
GAAGAAATGC TCGCGGTTGA AGAAAAACAC AATGCCTTAT TTGACAAGCG CTTAGCGCAA
GAAGAGGTAT GGATTCGTCA GGGCATTAAA GCGCGCAGAA CGCGCAACGA AGGTCGCGTT
AGGGCATTAA AAGCCATGCG TGAAGAGCGA GCCCGTCGCC GCAACCAAAT GGGCGAGGCC
AAAATAGAGC ACAACGTGGA TGGCATTTCG GGCAAGTTAG TGGCCGAAGT GAAACACGTC
AAATTCTCTT GGCAGGATAA ACCCATCATC AATGATTTTT CTTGCACCAT TGTTCGCGGC
GATAAAATTG GTCTTATCGG CCCCAACGGC ATTGGTAAAA GTACGCTCTT AAAGCTACTG
CTAGGTGACA TACAGCCGCA AGCCGGTGAA GTGAAAATGG GTACCAAGCT TACTGTGGCC
TATTTCGACC AGTTACGTGA CCAGCTTCAT TTAGAGAAAA GTGCAATCGA TAATATCGCC
GAAGGCCGTG ATTCCATCGA AATTAACGGT AAATCTCGTC ATATTATTAG CTATTTACAA
GACTTTCTTT TTAGCGGCGA ACGCGCTCGC ACACCAATTA AAGCGTTGTC GGGTGGTGAG
CGAAACCGGG TGCTGTTGGC CAAGCTCTTC AGCAAGCCTA GCAACCTATT GGTAATGGAT
GAGCCAACCA ACGACCTCGA CGTAGAAACC CTAGAGCTAC TCGAAAGCCT GTTGATGGAT
TATCAAGGCA CCTTGCTACT GGTAAGTCAC GATAGGGAAT TTTTAGATAA CGTAGTGACA
AGCTCCATTG CGTTTGAAGG CAACGGCAAG CTACTGGAAT ATGTAGGTGG TTATACCGAT
TGGCTGCATC AAGGTGGCAA GTGGCCAGAC GGGGCTGAGC AGGCTCGCGC AGAAGCTGAG
GCGCCTAAAA AAGAAGCTGC AAGCCCTAAG CCTGCAGTAT CTAAGCCGGC AACACCCAAG
CCTGCGGCTA AAAAATTAAG CTACAAGCTG CAACTAGAGC TAGATAAGCT ACCTGCCGAA
CTGGAAGAGC TAGAAGAAAA AGTCGAAGCA CTACAAACGC AGGTGGGCGA CCCAGCGTTT
TATACTAAAG ACCCAGCAGA ATCGGCTAAA ACCCTAGAAG AGTTGGCTAA ACTGGAAGCC
TTTCTGCAAG CGCGCTATGC CCGCTGGGAA GAGCTTGAGG CAATGAAAGA ATAG
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| Protein sequence | MPLLKLDKYQ LHYGEQAIFD DLSLNLEPGD RLCIIGRNGV GKSTLLKCIQ GDIDPDSGQR
WLNTGVKVAS LSQDLPEAGD LTVFEMIAQA MPELGADLAQ FAKLVQQPDT DLELLERVQH
RIEAADGWRF QNKIEQVITR LDLDGEAKMS ALSGGWRRRV ALAQALVVEP DVLLLDEPTN
HLDIAAIRWL EEQLLSFAGA LVFITHDRAF LRALSNKIGE LDRGQLSTWD GDYDSFLTYR
EEMLAVEEKH NALFDKRLAQ EEVWIRQGIK ARRTRNEGRV RALKAMREER ARRRNQMGEA
KIEHNVDGIS GKLVAEVKHV KFSWQDKPII NDFSCTIVRG DKIGLIGPNG IGKSTLLKLL
LGDIQPQAGE VKMGTKLTVA YFDQLRDQLH LEKSAIDNIA EGRDSIEING KSRHIISYLQ
DFLFSGERAR TPIKALSGGE RNRVLLAKLF SKPSNLLVMD EPTNDLDVET LELLESLLMD
YQGTLLLVSH DREFLDNVVT SSIAFEGNGK LLEYVGGYTD WLHQGGKWPD GAEQARAEAE
APKKEAASPK PAVSKPATPK PAAKKLSYKL QLELDKLPAE LEELEEKVEA LQTQVGDPAF
YTKDPAESAK TLEELAKLEA FLQARYARWE ELEAMKE
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