| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1768 |
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| Symbol | |
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| ID | 3966674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2256588 |
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| End bp | 2257271 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920851 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_527240 |
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| Protein GI | 90021413 |
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| COG category | [K] Transcription |
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| COG ID | [COG1802] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000000893003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCAAAA ATACTAAAAT TAATTACGAC CGCCCCGCTT CAGGCCAAAT ATTCGAATAC
CTGCGCGACG CCATCGTAAG CATGGAATTA CGCCCGGGCC AAATGATTGC AGAAACCAGC
CTAGCAGAGC AGTTTGGTGT TAGCCGAACC CCCGTTCGTG AAGCGCTAAT TAAATTATCG
AACATAGGTT TTGTAGAGGT GTTACCCCAA CGCGGTACAT ATGTAACCAA GTTCAGTACG
CAAAAAATTC TCGAGGCTAG GTTTATACGC GAAGCCTTAG AAGTCGCTGT AGCAGCCGAT
TTAGCATCTA ACGTTACCGA AGAATTAGTA GAAGCTTGCC AAGCAATTAT TGAAGCGCAA
TCCAAAGCTG CCGATGAAGA CGATTCCATC ACCTTTCAAA AGCTCGATGA TGAGTTCCAT
CAAATGCTTG CGCAGCACAC ACAGTACGCG CGTGTTGGCA GCTTAATTGA AGCAGAAAAA
GCCCATATGG ATAGGGTAAG AAATCTAAGC CTTCAAGAAG CCGGGCAATT TAAACGCGTG
CTAGCACAGC ACAAAGCCAT TGTTAAAGCC ATTAAAGCTG GTGACGCCAA CAAAGCCCAA
GAGGCTATGT CTACGCATAT GCGCGAGGTA TATAAAATAC TTACAGTTAT ACCTGCCGAG
CACCCAGAAT ACTTTATAGA TTAA
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| Protein sequence | MIKNTKINYD RPASGQIFEY LRDAIVSMEL RPGQMIAETS LAEQFGVSRT PVREALIKLS
NIGFVEVLPQ RGTYVTKFST QKILEARFIR EALEVAVAAD LASNVTEELV EACQAIIEAQ
SKAADEDDSI TFQKLDDEFH QMLAQHTQYA RVGSLIEAEK AHMDRVRNLS LQEAGQFKRV
LAQHKAIVKA IKAGDANKAQ EAMSTHMREV YKILTVIPAE HPEYFID
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