| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1762 |
|---|
| Symbol | |
|---|
| ID | 3966668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 2249676 |
|---|
| End bp | 2251070 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637920845 |
|---|
| Product | Na(+)/H(+) antiporter 1 |
|---|
| Protein accession | YP_527234 |
|---|
| Protein GI | 90021407 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3004] Na+/H+ antiporter |
|---|
| TIGRFAM ID | [TIGR00773] Na+/H+ antiporter NhaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAATG AAACGCCTAA AAAGTTCATT CCTAACGAGC AAAACCCCAT GCCCCGATGG
GAAAAGAAGT TCAATAAGAT TCTCACGCCC TTCGAACGCT TTGTAAACAG AACAACCACA
GGCGGCCTTA TTCTTATGAT GGCTGCGCTA ATAGCATTAG CACTGGCAAA CAGCCCGCTT
GCTCACCATT ACCTGCATGC ATTGCATGTA CCCCTAGGTT TAAACCTTGG TGATTGGCGT
ATAGAGAAAA GCCTGCACCA CTGGGTTAAC GACGGCTTAA TGGCATTATT TTTCTTTGTT
GTTGGCCTGG AGCTAAAACG TGAGATGCTC GTTGGGGAGC TGGCTGAAAT CCGCAAAGCG
GTATTGCCCA TAGTTGCGGC GATTGGCGGC ATGGTTATAC CCGCCATATG TTATATGTCG
TTAAACCTTA ACGACGAAAC TTTTCGCGGC TGGGGTATAC CCATGGCGAC GGACATTGCT
TTTGCCCTTG GCGTGATTGC ACTTTTGGCT AGCCGTGTGC CTAAAGCGCT CATCACATTC
TTAGTGGCAC TGGCCATTGT AGACGACTTG GGTGCAGTGG TAGTTATTGC CGTTTTTTAC
ACGCAAGATC TTGCATGGAG CTTTCTAATC GCCGGCGCAC TACTAACTTG CTTGCTCATA
TTTTTTAACA TGATTGGTAT TCGTAAACCC AGCGTGTACT TTTTCGTTGG CCTAATCCTG
TGGTTTGTGT TCTTAAAGTC GGGCGTACAC GCCACCCTAG CCGGTGTAAT TACCGCATTT
ACTATTCCGG CAAAACCAAA ATTCAATACA CTTACTTTTA GCAATCGTGT GCAAGATATA
CTTTACAAGT TTAGAAAAGG CTGTGAAGAA GATGAAAGTA TACTAAGGAA TGAACACTTA
AGCGGCTTAG TTCAAACCCT AGAAAACGGT GTAGTTGGTG TACAAACGCC ATTACAACGC
CTAGAGCACT CTTTTCACAA GCCGGTTGCA TTTTTTATTC TACCCGTATT CGCAATATTT
AATGCGGGCG TAACCATCGA CTTTGGCAAT GCCTTTCAAC TATTTAATCA CCCAATAACC
CTAGGTGTGG TATTTGGCCT GCTGTTCGGT AAATTTGTAG GTATTACTGG CGCTTCGTGG
CTAGCCATAC GCTTTGGCCT TTGCTCACTG CCAAACGATA CAAGTATGAA ACACATTATT
GGCGCATCTA TGCTGGGCAG TATCGGCTTT ACTATGTCTA TCTTTATTGC TGAGCTCGCC
TTTGTATCGC AACCCGAAAT GATCATTCAG GCAAAACTGG GTATTTTACT TTCATCGCTA
GTAGCAGGCG TTGCTGGCTA TTTATGGCTG CATAAACTAG GCGGCGAAAA ATCACGTATA
GGATCGAGTT TGTGA
|
|---|
| Protein sequence | MSNETPKKFI PNEQNPMPRW EKKFNKILTP FERFVNRTTT GGLILMMAAL IALALANSPL
AHHYLHALHV PLGLNLGDWR IEKSLHHWVN DGLMALFFFV VGLELKREML VGELAEIRKA
VLPIVAAIGG MVIPAICYMS LNLNDETFRG WGIPMATDIA FALGVIALLA SRVPKALITF
LVALAIVDDL GAVVVIAVFY TQDLAWSFLI AGALLTCLLI FFNMIGIRKP SVYFFVGLIL
WFVFLKSGVH ATLAGVITAF TIPAKPKFNT LTFSNRVQDI LYKFRKGCEE DESILRNEHL
SGLVQTLENG VVGVQTPLQR LEHSFHKPVA FFILPVFAIF NAGVTIDFGN AFQLFNHPIT
LGVVFGLLFG KFVGITGASW LAIRFGLCSL PNDTSMKHII GASMLGSIGF TMSIFIAELA
FVSQPEMIIQ AKLGILLSSL VAGVAGYLWL HKLGGEKSRI GSSL
|
|---|
| |