Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1720 |
Symbol | |
ID | 3966526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2193324 |
End bp | 2194286 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637920801 |
Product | condensin subunit ScpA |
Protein accession | YP_527192 |
Protein GI | 90021365 |
COG category | [S] Function unknown |
COG ID | [COG1354] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCGGGTA CAGAAGAAAA TACAGCAGAT ACGGAAGAGC TCGTATTGAC TCAAGAAGTG ATGCCCGAAG CAGGTTCTCA AGAGGCTGTA GCGAGTGAAG CAGATTCCGA GGCGCAACCG CAAGCAGAAG GCGCAGCCGA GCCAGACGCA GAAGACCCCC ATTCGCCAGA ACAGTCTGAA ATGCCCTTTG CGCTTGTATA TGGCAAGGCG TTTACCAATT TACCTAAAGA TCTATACATA CCGCCAGATG CATTAGAAGT TATTTTAGAA TCTTTTGCTG GCCCGCTCGA TTTATTGTTG TACCTAATTC GCAAGCAAAA TATCGATATT CTTGAAATTG ATGTTTCCGC TATTACCCAT CAATACGTGG CATACGTTGA AATGATGGAA GCAGTGCACT TTGAGTTGGC TGCTGAATAC TTGGTAATGG CCGCAATGCT CGCTGAGATT AAATCGCGCA TGCTGCTTCC GCGATCTTCC GATAGCGAAG AAGAGGAAGA AGACGATCCA CGTGCTCAAC TTATCCGACG CCTGCAAGAG TACGAGCGCT TTAAGCAAGC AGCGGAAGAT ATAGATGAAT TGCCGCGCTT ACACCGCGAT ACGCAAATAG GCAAAGCTAA ACCACCTAGC AGAAGCTCTA CGCGCCCAGA CCCAGACGTG GATATGCGCG AGTTAATGCT GGCGCTTTCG GACGTACTGC GCCGAGCGGA TATGTTTACC AGCCACCACG TCGAGCGCGA GAAATTATCT ACCCGCGAGC GTATGGCGCA GGTGCTAGAT CAGCTAAAAG GGCGCCAATT TGTGCCATTT GTTAGCTTAT TTACCGTAAG TGAAGGTCGT TTAGGGGTTG TGGTAACCTT TTTGGCGATC ATGGAGCTTA TTAAAGAATC GTTATTGGAA ATGGTGCAAA CCGAAGCGTT TGGCCCCATT CATGTTAAAG CGCGCGGCGA AATTAGCGAA TAA
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Protein sequence | MSGTEENTAD TEELVLTQEV MPEAGSQEAV ASEADSEAQP QAEGAAEPDA EDPHSPEQSE MPFALVYGKA FTNLPKDLYI PPDALEVILE SFAGPLDLLL YLIRKQNIDI LEIDVSAITH QYVAYVEMME AVHFELAAEY LVMAAMLAEI KSRMLLPRSS DSEEEEEDDP RAQLIRRLQE YERFKQAAED IDELPRLHRD TQIGKAKPPS RSSTRPDPDV DMRELMLALS DVLRRADMFT SHHVEREKLS TRERMAQVLD QLKGRQFVPF VSLFTVSEGR LGVVVTFLAI MELIKESLLE MVQTEAFGPI HVKARGEISE
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