| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1706 |
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| Symbol | |
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| ID | 3966493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2180262 |
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| End bp | 2181464 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920787 |
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| Product | signal peptide and transmembrane prediction |
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| Protein accession | YP_527178 |
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| Protein GI | 90021351 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.873275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCA TTAATCGAGG GCGCATATTT AGTGCCAGCT GCGTTGCACT TGTTGTAACC
GCTATGACAC TTGGTGTGAG AGCCGGCATT ATGACCGAGC TCGCAATGAA ATTTGATTTA
ACTGATGTAC AGCTCGGCTG GATTGCAGGT ATGGCCTTTT TAGGCTTCCC TGTTGCCACC
ATGGTGGGCG GCTTAATCTA TAACTTTATT GGCCCAAAGA AGTTAATGTA CATAGCATTC
GCAGGCCACC TACTAGGTTT AATACTTACT ATTACTGCCA GCGGATTTTG GACGCTTATA
ATTAGTACTT TCTGTATTGG TTTTGCGAAT GGTTCGGTAG AGGCAGCGTG TAACCCACTC
ATCGCCGACA TTTACCACAA AAACAAAACC ACTATGCTCA ACCGCTTTCA CGTTTGGTTC
CCTGGGGGTA TTGTGATTGG TGCACTTATG TCAGCGGGCT TGAGCCAGTT AGGCATGGGA
TGGGAAATAA AAATTGCCAT TATGTTGCTG CCAACAATCG TTTACGGCTA CATGATATTT
GGCCAAACCT TCCCAGAAAT GGAAAATACC GAAGTAGATA CCGCCATTAA TTTGCGCGCT
TTATTTACCC CACTTTATAT TTTTATGCTT ATCTGTATGA CCCTAACCGC CACCACAGAG
CTAGGTACAC AGCAATGGAT TGAGCGCATA CTAGGTAACT CTGGTGCCCA CCCCATGTTG
ATTCTCGCTA TGGTGACAGG CTTAATGGCA GTGGGTCGAT ACTTTGCTGG CCCCATTATT
CACGCATTCA ACCCAGCTGG TGTTTTGTTA TTTTCTGCAA TAATGGCATT TTTAGGTATT
TACCTAATGA GTATTGCATC TGGCCCATTG GTTTATGCTG CTGCCATTAT TTTTGCTCTT
GGCGTAACTT ACTTTTGGCC AACTATGATT GGGTTTGTTG GCGAAAACTG CCCTAAAACT
GGCGCGCTTG GCATGTCCCT TATTGGTGGT GTGGGTATGT TTTCTGTAAG TATGTGGAGC
CCAGTAATAG GCGGCTGGTT AGAATCCGCC AGAGCAGATG CGTTAGCCAA TGGCTTAGTA
GGTGAAGCGG CTGAACTGGC AGCGGGCCAA TCCACTTTAG CCAATATATC GCTCTTCCCA
ATAGTATTAA TTGTGCTATT CACTGGCCTA TTAATATACA AGCGCAAATT TGCACCTAAA
TAA
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| Protein sequence | MTTINRGRIF SASCVALVVT AMTLGVRAGI MTELAMKFDL TDVQLGWIAG MAFLGFPVAT
MVGGLIYNFI GPKKLMYIAF AGHLLGLILT ITASGFWTLI ISTFCIGFAN GSVEAACNPL
IADIYHKNKT TMLNRFHVWF PGGIVIGALM SAGLSQLGMG WEIKIAIMLL PTIVYGYMIF
GQTFPEMENT EVDTAINLRA LFTPLYIFML ICMTLTATTE LGTQQWIERI LGNSGAHPML
ILAMVTGLMA VGRYFAGPII HAFNPAGVLL FSAIMAFLGI YLMSIASGPL VYAAAIIFAL
GVTYFWPTMI GFVGENCPKT GALGMSLIGG VGMFSVSMWS PVIGGWLESA RADALANGLV
GEAAELAAGQ STLANISLFP IVLIVLFTGL LIYKRKFAPK
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