| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1694 |
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| Symbol | |
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| ID | 3966481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2165801 |
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| End bp | 2166427 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637920775 |
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| Product | periplasmic chaperone LolA |
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| Protein accession | YP_527166 |
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| Protein GI | 90021339 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
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| TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.972431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.23288 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTTTAA CGAAAGTTTG TTTGGTGGCT GTAACTATGT TGGTAGCCAC AGTTGTACGA
GCTGATGATA TTGATGCGTT GATAGGTAAG CTTGATCAAT TTAATACGGT CAGCGGTAAG
GCAATGCAGG TAATCACCTC GGCAGACGGG GAAGAAATAC AAAAAACGGA GAGCGAATTT
AAAATTTTAC GCCCCGGGTA TTTTTACTGG CGAACACTGC CTCCGTACGA GCAAATAATT
GTTTCTAACC CAGACACCAT CTCGGTGTAC GACCCAGATT TAGAGCAAGT AAGTATTTAT
CAATCTGAAA AAATGCGTAA TAGCCCCGCA AGTATTCTTT CGGGCAACCG AAGTGCGATA
GAAAAGCAGT TTAAAGTAAC CAAAAGCGGT GCGAGTAACG ATAAAAAAAG CACCAGCTTT
GAGTTAAGTT ATTTAGATAC TGCAAATGCC GATTTTAAGA AGTTGACTGT TACTTTCAAG
AAAGACCAGC TTGCGTCAAT TGTTATGCAC GATATGCTCG ATCAAGTTAC ATCTATTACT
TTCGGTAAAG TCAATACTAA AGCTGCGCTT ACCCCCGCAC AGTTTGAATT TACGCCGCCC
GCTGGTGTAG ATGTAATTAT CGAATAG
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| Protein sequence | MRLTKVCLVA VTMLVATVVR ADDIDALIGK LDQFNTVSGK AMQVITSADG EEIQKTESEF
KILRPGYFYW RTLPPYEQII VSNPDTISVY DPDLEQVSIY QSEKMRNSPA SILSGNRSAI
EKQFKVTKSG ASNDKKSTSF ELSYLDTANA DFKKLTVTFK KDQLASIVMH DMLDQVTSIT
FGKVNTKAAL TPAQFEFTPP AGVDVIIE
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