Gene Sde_1693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1693 
Symbol 
ID3966480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2163413 
End bp2165761 
Gene Length2349 bp 
Protein Length782 aa 
Translation table11 
GC content49% 
IMG OID637920774 
ProductDNA translocase FtsK 
Protein accessionYP_527165 
Protein GI90021338 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1674] DNA segregation ATPase FtsK/SpoIIIE and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.782698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.477366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTAAAA AAGAATCTAT CCAAACCGCA GAGCAGGGAG TACATTCCAG CCGATTACTG 
CTAATTGTGC GCGAAGGTTT ATTGTTGGCG CTAATTGCTG CCTGTGCTTA CCTTGCGCTC
GCCTTGTTCA CCTATAGCCC TAACGACCCA GGTTGGTCTA TTACGGGTAC TGGCGCCCCG
ATAGAAAATG CCGGCGGCCC AGCAGGGGCA ATGCTAGCAG ATATTTTCTT ATCCTTGTTT
GGCCGTTTAG CCTACTTGTT CCCAATTTTG CTAGCTTATC AGGTGTGGTT GCAGTTGCGA
GACCGCAGCG GGCTGCCTTT TGACCCAATT ATCCTACTGT TGCGCTTTGT TGGCCTGTGC
TTGGTTATGG TTGCAGGCAC CGGCATTGCT GTAATGCAGT ACGGCATTGC TAGCGAAGCA
CTTCCTTTTT CATCTGGCGG TTACCTTGGC CTCACTGTCG CCACCGCGAT TGACGGCACG
TTTGGCTACA TTGGCGGTAC ATTGTTGCTG CTTTCTACCT TCTTGTTTGG TCTCACAATA
TTTGTCGACA TCTCATGGCT TGCGGTAATG GATTGGATTG GTGCAAAGGT TGTGCAGTTT
TCTGGCTATC TTCAGCATCG GTTCATTGTA TGGCGCGCAA ACTCTAAGGA AAGAAAACAA
GTAAAAGAAG CCGTGCAGAA ACGTAAAGAA GCCGTAAAAA TACAGGTAAA GAAGGAGGAG
AAGCGCATAC CCCCTACCAT TACGCCGCCT AAAAAGCGCG AGGAGCCAAG CGTACGGGTT
CAAAAAGAGA AGCAGCAAAA ACTTAAATTT GATGACAACG AAGTTGTTGG TGAACTGCCT
CCAATCGATT TGCTAGATGC CGGCGAAAAG CGCTCAGATA AAGGTTTCTC GGAAGAGTCG
CTAGAGGCTA TGAGTAGGCT TCTAGAAATA AAGCTAAAAG ATTTTGGTGT AATTGCCGAA
GTGACGGCAG TGTTGCCGGG GCCGGTTGTT ACTCGCTTTG AAATTCAGCC AGCAGCAGGT
GTAAAGGTAA GCAAAATTAC CAACCTTGCA AAAGATTTGG CGCGCTCGCT GGCGGTTAGC
AGTGTACGTG TGGTTGAGGT GATTCAGGGC AAGTCGGTTG TTGGGGTGGA AATTCCTAAC
GAGCACCGCG AAATGGTGCG CTTAAGTGAA GTTATTGCTT CTGAAGTGTA CGAAAAGTCC
AAGTCGCCGC TAACACTGGC CCTAGGTCAC GATATTTCGG GCGAACCAAT TGTTGCCGAT
CTTGCCAAAA TGCCGCATTT GTTGGTTGCG GGTACCACGG GTTCTGGTAA GTCGGTGGGG
GTTAACTCTA TGTTGGTCAG TATGCTTTAT AAAGCTACTC CCGAAGAGTT ACGCCTTGTA
TTGGTCGACC CGAAAATGTT GGAGCTTTCG GTTTACGACG GTATTCCACA TTTGCTCACA
CCGGTAATTA CCGATATGAA AGAAGCCGCA ACTGGCTTGC GCTGGTGTGT GGGGGAAATG
GAACGTCGCT ATAAGTTAAT GTCTAAGCTA GGCGTACGCA ATATTGCCGG CTACAACAAA
AAAGTTCGCG ATGCCAAAAA AGCTGGCGAG CCTATTTTAG ACCCACTGTG GTCGCCTGAA
GACGATGGCG TGGTAGAAAT AGAAGGCGCT ACCGCCCCAG AGTTAGATAC CTTGCCCTTT
ATTGTGGTGG TTATCGACGA ATTTGCCGAC ATGATTATGA TTGTAGGCAA AAAAGTAGAG
CAGTTAATTG CGCGTATTGC ACAAAAAGCA CGTGCCGCGG GTATTCATTT AGTGCTTGCT
ACGCAGCGGC CGTCGGTGGA TGTAATTACT GGTTTAATTA AGGCGAACGT GCCTACGCGC
ATGGCGTTTC AGGTTTCATC CAAAATTGAT TCGCGCACAA TTTTAGATCA AGGTGGGGCG
GAGCAATTAC TTGGTCACGG TGACATGTTG TTCTTGCCGC CGGGTACTGC ACACACAGTG
CGTGTGCATG GCGCGTTTAT TGACGATCAC GAAGTGCACA ACGTGGTTAA CGATTGGAAA
AAACGCGGCG AGCCAAATTA TTTAGATGAA ATATTTAGCG AATCGGTAGA TAGCATCCCC
GTGCCTGGGT TTAGCAATGA GGGCGACGAG GGCGGTGGTG ACCCCGAATC AGACGCATTG
TACGACCAAG CGGTGGCAAT TGTTACTGAG TCGCGCAAAG CAAGTATTTC TTCGGTACAG
CGTAAATTAA GAATTGGTTA TAACCGCGCC GCGCGTTTAA TTGAGCAAAT GGAAGCGGCA
GGGGTAGTAA CCGAAATGGG CAACAATGGC AGCCGCGAAG TTTTGGCGCC ACCACCGCCT
AAACGGTAA
 
Protein sequence
MSKKESIQTA EQGVHSSRLL LIVREGLLLA LIAACAYLAL ALFTYSPNDP GWSITGTGAP 
IENAGGPAGA MLADIFLSLF GRLAYLFPIL LAYQVWLQLR DRSGLPFDPI ILLLRFVGLC
LVMVAGTGIA VMQYGIASEA LPFSSGGYLG LTVATAIDGT FGYIGGTLLL LSTFLFGLTI
FVDISWLAVM DWIGAKVVQF SGYLQHRFIV WRANSKERKQ VKEAVQKRKE AVKIQVKKEE
KRIPPTITPP KKREEPSVRV QKEKQQKLKF DDNEVVGELP PIDLLDAGEK RSDKGFSEES
LEAMSRLLEI KLKDFGVIAE VTAVLPGPVV TRFEIQPAAG VKVSKITNLA KDLARSLAVS
SVRVVEVIQG KSVVGVEIPN EHREMVRLSE VIASEVYEKS KSPLTLALGH DISGEPIVAD
LAKMPHLLVA GTTGSGKSVG VNSMLVSMLY KATPEELRLV LVDPKMLELS VYDGIPHLLT
PVITDMKEAA TGLRWCVGEM ERRYKLMSKL GVRNIAGYNK KVRDAKKAGE PILDPLWSPE
DDGVVEIEGA TAPELDTLPF IVVVIDEFAD MIMIVGKKVE QLIARIAQKA RAAGIHLVLA
TQRPSVDVIT GLIKANVPTR MAFQVSSKID SRTILDQGGA EQLLGHGDML FLPPGTAHTV
RVHGAFIDDH EVHNVVNDWK KRGEPNYLDE IFSESVDSIP VPGFSNEGDE GGGDPESDAL
YDQAVAIVTE SRKASISSVQ RKLRIGYNRA ARLIEQMEAA GVVTEMGNNG SREVLAPPPP
KR