| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1688 |
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| Symbol | |
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| ID | 3966475 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2157406 |
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| End bp | 2157624 |
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| Gene Length | 219 bp |
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| Protein Length | 72 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637920769 |
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| Product | translation initiation factor 1 |
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| Protein accession | YP_527160 |
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| Protein GI | 90021333 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0361] Translation initiation factor 1 (IF-1) |
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| TIGRFAM ID | [TIGR00008] translation initiation factor IF-1 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000000000115833 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAAG AAGACAATTT TGAACTGGAA GGCGAAGTCA TCGACACGCT TCCAAACACC
ACATTTCGAG TCAAATTAGA AAATGGCCAC GTTGTTACTG CGCATATCTC TGGCAAAATG
CGTAAGAACT ACATTCGCAT TCTTACTGGC GATAAAGTCA AAGTAGAAAT GACTCCATAC
GACCTATCTA AAGGCCGTAT TACATACCGC GCCCGCTAA
|
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| Protein sequence | MAKEDNFELE GEVIDTLPNT TFRVKLENGH VVTAHISGKM RKNYIRILTG DKVKVEMTPY
DLSKGRITYR AR
|
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