| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1650 |
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| Symbol | |
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| ID | 3965166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 2116547 |
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| End bp | 2119291 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637920731 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_527122 |
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| Protein GI | 90021295 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGCAC TCACTCGTCC CAAATTTGGT GCACACACCA AACTGTTCCA CGCTATAAAG
CATGCGTTAA CCCCCGTTAT ATTTTTAGGT GCTGCTGCTT TCCCACTTGC CGCTCACAGC
CAATACAACA TGGAAAACCT CGACCGCGGG TTGGTGGCCA TAGATCGCAA AGACGGCAGC
GTATTAGTAA GCTGGCGCTG GTTGGGGCAA GAGCCAGATA ACACCAGCTT CAACGTATAT
AGAAACGGCA CACTATTAAC CAGCTCCCCC CTTACCAATA AAACAAACTT TGTAGATACC
AGCGGCAACC CAAACGCTAA TTACGCGGTA GAAGCCATAG TAAACGGCGC GAGCCAATCA
CTAGCCACCA CACATGTATG GAGCGATATA TACCGCACTA TTCCGCTGCA AAGACCACCA
GGTGGCACCA CCCCCGACGG AGTGGCATAC ACCTATAGCC CCAACGATAT AAGCGCAGCC
GATTTAGACG GCGATGGCGG TTACGAGCTA ATCGTAAAAT GGGACCCCTC CAACGCAAAA
GACAACTCGC AAAGTGGCTA CACCGGCAAT GTGTATCTCG ACGCTTACGA AATATCTGGC
GAGTTTATGT GGCGCATAGA CCTAGGCCGC AATATTCGAG CAGGCGCCCA CTACACGCAA
TTTTTAGCAT TCGATTTTGA TAGCGATGGC AAAGCAGAAG TTGCAGTTAA AACCGCAGAC
GCCACCAAAG ACAGCCAAGG AGTAGTAATA GGAGACAGCA ATGCCGATTA CCGCAACAGT
GCAGGCTATG TTTTATCTGG CCCCGAATAC CTCACCATGT TTGAAGGCCA AACCGGTAGA
GCGCTAAATA CCGTTAACTA CGTACCCGCG CGCGGCAGTG TTTCTAGCTG GGGCGACAAC
TACGGCAACC GTGTTGATAG ATTTTTAGGT GGCGTAGCCT ACTTAGATGG CCAAAACCCA
AGTTTGATTA TGTCGCGCGG GTACTACACC CGCACCGTGG TAGCAGCATG GGACTGGCGC
AATGGGCAGC TTAGCCAACG CTGGGTATTT GATTCCAACA CCAGTGGCAA CAGCAGCTAT
GCAGGCCAAG GCGCGCACAG CCTTACCATT GGCGATGTAG ATGCAGACGG AAAACAAGAA
ATTGTATTTG GCGCCATGAC CATAGATGAC AACGGCACCG GCTTGAACAA TACCCGCCTA
GGTCACGGCG ATGCACTGCA CCTATCCGAC ATGGACCCAA GCAACCCAGG CTTAGAAGTG
TTTATGGTGC ACGAATGCCC CTCTTGCTAT GGCGAGCACG GAATAGAAAT GCACGATGCC
GCCACCGGCC AAATACTATG GAGCCACCCA GGCGACTACA TAGACATAGG CCGAGGTGTA
GCCATGGATA TAGACCCACG TTATGCCGGC TACGAAGCTT GGGCTTCGCG CGGTGGTTTA
TACAGTGCAA AAGGCGAAAC AATATCGAGC ACGCGCCCGT CGCAAATAAA CTTTGCCGCT
TGGTGGGATG GCGACTTACT GCGCGAAATA CTCGATAACA ATTACATAAA CAAATGGAAC
TACACCGCCA GCTCTACCAC GCGCTTGCTA AGCGCAGGTA ACTACGGTGC AGCATCGAAC
AACGGCACCA AGGCTACACC AGGGCTTTCG GCCGATATTC TTGGTGACTG GCGCGAAGAA
GTGGTATGGC GCAACAGCAA CAACCAAGAA CTTATGGTGT TTACCACCCC ACACGAAAGT
GAATACCGCT TAAGAACCCT AATGCACGAC CCGCAATACC GCACAGCCAT AGCTTGGCAA
AACGTGGGCT ACAACCAACC ACCTCACCCC TCTTACTTTT TGGGTGCGGG TATGACTACC
CCCAACCAAC CACACATAAC CATAGTTGGC GAAGGCACAG TGCAGCCTCC AGCCCCTACA
GGCGACGCAA TACAAGAAAA CGCCACCGGC TTTTGCGGCT ACGAAGGCAC TATAGATAGC
AACCACTCTG GCTATACAGG CGCGGGCTTT ACTAACACTA CCAACGCAAC AGGTGCAGGC
ATTAACTGGA ACCTACATGC GTCCACCGCC GGTACATACC GCCTAAGCAT GCGTTACGCG
AATGGCAGTA CGGCACGAGG TGCTGTGCTA AACGTAGAAA CAACCGGTAA TAGCTACCCC
ATGGCATTTG CACCAACAAG CACATGGACA AACTGGCAAG AAGAATATGT AGACGCCCAC
CTAAACGCCG GCTACAACAG CATTCGGCTT GAAGCAAACC AAGCGGCAGG TTTGCCCAAC
CTCGATGCCA TCTACCTAGC CGATGGTCTT ACGGCGGCAG CGTGCGGCCA AACATCTAGC
AGCAGCTCGT CCTCCAGTAG CTCCTCTAGT TCTTCCAGCA GCTCTTCAAG CTCTAGTAGC
AGTTCCAGTA GTAGCTCGAG CAGCAGCTCA TCCGGCGGTA CAACAGCAGG CCTAGCTTGC
GCCAACGGCA GTACAGATAC ATGGGGAACG GGGTTTGTGT TAAACGGCTT CCAAGTAGAA
AACGAAGGCC AGCAAGCCAC CAATAACTGG CAAGTGACAC TTCAATTCGA CCAGCCCGTA
AACATAACCA ACGCATGGGG TGTAAACGTA GAAACAACAG GCACAACCGT TGTAGCAACA
AGCGTAGGCT ACAACAGCCA CCTAAACCCG GGGCAAAGTG CTAGCTTTGG AATGCAAGGA
ACATCGGCAA CGGCGGTAAG CAACCCGCTA TGCAGTGCCC AGTAA
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| Protein sequence | MSALTRPKFG AHTKLFHAIK HALTPVIFLG AAAFPLAAHS QYNMENLDRG LVAIDRKDGS
VLVSWRWLGQ EPDNTSFNVY RNGTLLTSSP LTNKTNFVDT SGNPNANYAV EAIVNGASQS
LATTHVWSDI YRTIPLQRPP GGTTPDGVAY TYSPNDISAA DLDGDGGYEL IVKWDPSNAK
DNSQSGYTGN VYLDAYEISG EFMWRIDLGR NIRAGAHYTQ FLAFDFDSDG KAEVAVKTAD
ATKDSQGVVI GDSNADYRNS AGYVLSGPEY LTMFEGQTGR ALNTVNYVPA RGSVSSWGDN
YGNRVDRFLG GVAYLDGQNP SLIMSRGYYT RTVVAAWDWR NGQLSQRWVF DSNTSGNSSY
AGQGAHSLTI GDVDADGKQE IVFGAMTIDD NGTGLNNTRL GHGDALHLSD MDPSNPGLEV
FMVHECPSCY GEHGIEMHDA ATGQILWSHP GDYIDIGRGV AMDIDPRYAG YEAWASRGGL
YSAKGETISS TRPSQINFAA WWDGDLLREI LDNNYINKWN YTASSTTRLL SAGNYGAASN
NGTKATPGLS ADILGDWREE VVWRNSNNQE LMVFTTPHES EYRLRTLMHD PQYRTAIAWQ
NVGYNQPPHP SYFLGAGMTT PNQPHITIVG EGTVQPPAPT GDAIQENATG FCGYEGTIDS
NHSGYTGAGF TNTTNATGAG INWNLHASTA GTYRLSMRYA NGSTARGAVL NVETTGNSYP
MAFAPTSTWT NWQEEYVDAH LNAGYNSIRL EANQAAGLPN LDAIYLADGL TAAACGQTSS
SSSSSSSSSS SSSSSSSSSS SSSSSSSSSS SGGTTAGLAC ANGSTDTWGT GFVLNGFQVE
NEGQQATNNW QVTLQFDQPV NITNAWGVNV ETTGTTVVAT SVGYNSHLNP GQSASFGMQG
TSATAVSNPL CSAQ
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