Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1633 |
Symbol | |
ID | 3965188 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 2096593 |
End bp | 2097660 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637920716 |
Product | hypothetical protein |
Protein accession | YP_527107 |
Protein GI | 90021280 |
COG category | [R] General function prediction only |
COG ID | [COG1559] Predicted periplasmic solute-binding protein |
TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.153927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAAAGT TAATAGTAAC TCTCTCTTTA TTCTTGGCTT TTGTAGTGGT ACTTAGCGGT GCCGTTGGGG CGTATTTTTG GCAGTGGCTG AATGCACCTA TTGCTTACCA AGCGCAATAC TTGCAAAGCG TTAATAACGT GTATCGCGTA GAGCGTGGTA GTAACTTAAC GCAAATAGCC AATGTATTGG CGCGCGAGCA AATAATTGAA TGGCCTAAAG TGTGGGTGCT TTATGCTCGT GCCTCTCAAA AAACAGCGGT AAAAGTAGGT GAATATAAAC TACTGGCTGG TGACACACCG CTTGTACTAT TAAACCGCTT AGTTTCTGGC GATGTAGTAA GTTACAGCGT TACTTTAATT GAAGGCAGCA CCTTTAAAGA CTTTTTAACT GCGCTACACG CGCAAGAAAA ATTGCAAAAA ACACTTGCGA GAAAAACCAC AGAGCAAATT CTTGCCGATT TGAATTTAGA TATTCAGCAC CCAGAAGGGT GGTTCTTCCC TGATACGTAC AATTATATTG CAGGGGATTC CGACGCAGAT ATTCTAAAAC GCGCCCATAA AACTATGCGT AAAGTGTTAG ACACTCAGTG GCAGGCACGC GCGCAAAACC TGCCTTACAC ACAACCTTAC GAGGCCTTAA TAATGGCCTC GATAGTTGAG AAAGAAACCG GCGTACCTTA CGAGCGTGAC GAAATAGCAG GGGTGTTTAT TCGCCGCTTA CAAAAAAGAA TGCGTTTACA AACAGACCCA ACAGTCATTT ATGGGATGGG CGAAAACTAC GCGGGCAATA TTACCCGCAA AGATTTGAGA ACACCTACAC CGTACAATAC TTATGTAATT AAAGGGTTGC CACCCACACC GATTGCCATG CCGGGTAAAG AGGCAATTTA CGCTGCGCTG CACCCAGCCG ATGGCGAGCA CCTGTATTTT GTGGCCAAAG GCGATGGCTC GCATTATTTC TCGTCAACAT TAGACGAGCA CCTAGCTGCA GTAGCGAAAT ACCAAAAGCG TCGAACCTCT AATTACCGGT CTGCGCCGCC AGTAAATACA CCTACCAAAA ATAATTAG
|
Protein sequence | MRKLIVTLSL FLAFVVVLSG AVGAYFWQWL NAPIAYQAQY LQSVNNVYRV ERGSNLTQIA NVLAREQIIE WPKVWVLYAR ASQKTAVKVG EYKLLAGDTP LVLLNRLVSG DVVSYSVTLI EGSTFKDFLT ALHAQEKLQK TLARKTTEQI LADLNLDIQH PEGWFFPDTY NYIAGDSDAD ILKRAHKTMR KVLDTQWQAR AQNLPYTQPY EALIMASIVE KETGVPYERD EIAGVFIRRL QKRMRLQTDP TVIYGMGENY AGNITRKDLR TPTPYNTYVI KGLPPTPIAM PGKEAIYAAL HPADGEHLYF VAKGDGSHYF SSTLDEHLAA VAKYQKRRTS NYRSAPPVNT PTKNN
|
| |