Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1597 |
Symbol | |
ID | 3965664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2052365 |
End bp | 2053564 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637920678 |
Product | Acyl carrier protein (ACP) |
Protein accession | YP_527071 |
Protein GI | 90021244 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.30891 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAAG TATTAATTAT TGGCGCCGGT GGCGTAGGTG GTGTGGTTGT GCACAAATGT GCCCAGCTAG CAGAAGTATT TGACGAAATT GTTTTAGCTA GCCGTACCGA ATCAAAATGT AAGGCTATTG CCGCGCAACT TTCGCGCCCG ATTAAAACAG CCCAAGTTGA TGCCGATAAC GTAGAAGAAT TAACTGCACT TTTAAAAGCA GAAAAGCCAG ACCTAGTAGT TAACGTAGCC CTGCCCTACC AAGACCTACA CATTATGGAT GCATGCTTAA ACGCTGGCAT AGATTACTTG GATACAGCTA ACTACGAGCC GCCAGAAGAA GCCAAATTTG AATACAGCTG GCAGTGGGCA TACCAAGAGA AATTTGAAAA GGCAGGCTTA ACAGCGTTAT TAGGCAGCGG CTTTGACCCT GGTGTAACTA ACGTATACAC CGCCTATTTA CGCAAGCACT ACCTCGACGA AATTCACGAG CTGGATATTA TCGACTGCAA CGCAGGTGAT CACGGTCAAC CGTTTGCCAC TAACTTCAAC CCAGAAATCA ATATTCGTGA AGTTACTGCG AAAGGTCGCT ACTGGAAAAA CGGCGAGTGG TGTGAAACGC CCCCGCTAAC GGTAAATCAA AGCTACGACT TCCCTGCTGG TATTGGCCCC AAAAATATTT ATTTGATGTA CCACGAAGAG TTGGAATCAA TCACCAAACA CTTCCCAGAA ATTAAACGTG CTCGTTTTTG GATGACCTTC TCCGATAACT ACCTGAAGCA CTTAGAAGTA CTGCAAAACG TGGGCATGAC CCGCATCGAC CCTGTGGACT ACAACGGCAC AGAAGTTATT CCATTGCAGT TTTTAAAATC CGTACTGCCC GACCCAGGCA GCTTGGGCCC ATTAACTAAA GGCAAAACCT GCATTGGTTG TGTAGCCAAA GGCATAAAAG ACGGCCAAGA AAAAATTTAC TACATATACA ACATTTGCGA TCACGAAGAA TGCTACGCAG AGGTTCAATC ACAAGCCATC TCTTACACCA CTGGTGTACC AGCAATGATT GGGGCCAAAA TGATTCTTGA AAACAAATGG AAGCGCCCAG GCGTTTGGAA TATGGAGCAG TTCGACCCAG ACCCATTTAT GGATGATTTG AACCAATATG GCTTGCCTTG GCAAGTTGTT GAGCTAGACA GCACAGGTCT TATCTCTTAA
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Protein sequence | MSKVLIIGAG GVGGVVVHKC AQLAEVFDEI VLASRTESKC KAIAAQLSRP IKTAQVDADN VEELTALLKA EKPDLVVNVA LPYQDLHIMD ACLNAGIDYL DTANYEPPEE AKFEYSWQWA YQEKFEKAGL TALLGSGFDP GVTNVYTAYL RKHYLDEIHE LDIIDCNAGD HGQPFATNFN PEINIREVTA KGRYWKNGEW CETPPLTVNQ SYDFPAGIGP KNIYLMYHEE LESITKHFPE IKRARFWMTF SDNYLKHLEV LQNVGMTRID PVDYNGTEVI PLQFLKSVLP DPGSLGPLTK GKTCIGCVAK GIKDGQEKIY YIYNICDHEE CYAEVQSQAI SYTTGVPAMI GAKMILENKW KRPGVWNMEQ FDPDPFMDDL NQYGLPWQVV ELDSTGLIS
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