Gene Sde_1597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1597 
Symbol 
ID3965664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2052365 
End bp2053564 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content45% 
IMG OID637920678 
ProductAcyl carrier protein (ACP) 
Protein accessionYP_527071 
Protein GI90021244 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1748] Saccharopine dehydrogenase and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.30891 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAAAG TATTAATTAT TGGCGCCGGT GGCGTAGGTG GTGTGGTTGT GCACAAATGT 
GCCCAGCTAG CAGAAGTATT TGACGAAATT GTTTTAGCTA GCCGTACCGA ATCAAAATGT
AAGGCTATTG CCGCGCAACT TTCGCGCCCG ATTAAAACAG CCCAAGTTGA TGCCGATAAC
GTAGAAGAAT TAACTGCACT TTTAAAAGCA GAAAAGCCAG ACCTAGTAGT TAACGTAGCC
CTGCCCTACC AAGACCTACA CATTATGGAT GCATGCTTAA ACGCTGGCAT AGATTACTTG
GATACAGCTA ACTACGAGCC GCCAGAAGAA GCCAAATTTG AATACAGCTG GCAGTGGGCA
TACCAAGAGA AATTTGAAAA GGCAGGCTTA ACAGCGTTAT TAGGCAGCGG CTTTGACCCT
GGTGTAACTA ACGTATACAC CGCCTATTTA CGCAAGCACT ACCTCGACGA AATTCACGAG
CTGGATATTA TCGACTGCAA CGCAGGTGAT CACGGTCAAC CGTTTGCCAC TAACTTCAAC
CCAGAAATCA ATATTCGTGA AGTTACTGCG AAAGGTCGCT ACTGGAAAAA CGGCGAGTGG
TGTGAAACGC CCCCGCTAAC GGTAAATCAA AGCTACGACT TCCCTGCTGG TATTGGCCCC
AAAAATATTT ATTTGATGTA CCACGAAGAG TTGGAATCAA TCACCAAACA CTTCCCAGAA
ATTAAACGTG CTCGTTTTTG GATGACCTTC TCCGATAACT ACCTGAAGCA CTTAGAAGTA
CTGCAAAACG TGGGCATGAC CCGCATCGAC CCTGTGGACT ACAACGGCAC AGAAGTTATT
CCATTGCAGT TTTTAAAATC CGTACTGCCC GACCCAGGCA GCTTGGGCCC ATTAACTAAA
GGCAAAACCT GCATTGGTTG TGTAGCCAAA GGCATAAAAG ACGGCCAAGA AAAAATTTAC
TACATATACA ACATTTGCGA TCACGAAGAA TGCTACGCAG AGGTTCAATC ACAAGCCATC
TCTTACACCA CTGGTGTACC AGCAATGATT GGGGCCAAAA TGATTCTTGA AAACAAATGG
AAGCGCCCAG GCGTTTGGAA TATGGAGCAG TTCGACCCAG ACCCATTTAT GGATGATTTG
AACCAATATG GCTTGCCTTG GCAAGTTGTT GAGCTAGACA GCACAGGTCT TATCTCTTAA
 
Protein sequence
MSKVLIIGAG GVGGVVVHKC AQLAEVFDEI VLASRTESKC KAIAAQLSRP IKTAQVDADN 
VEELTALLKA EKPDLVVNVA LPYQDLHIMD ACLNAGIDYL DTANYEPPEE AKFEYSWQWA
YQEKFEKAGL TALLGSGFDP GVTNVYTAYL RKHYLDEIHE LDIIDCNAGD HGQPFATNFN
PEINIREVTA KGRYWKNGEW CETPPLTVNQ SYDFPAGIGP KNIYLMYHEE LESITKHFPE
IKRARFWMTF SDNYLKHLEV LQNVGMTRID PVDYNGTEVI PLQFLKSVLP DPGSLGPLTK
GKTCIGCVAK GIKDGQEKIY YIYNICDHEE CYAEVQSQAI SYTTGVPAMI GAKMILENKW
KRPGVWNMEQ FDPDPFMDDL NQYGLPWQVV ELDSTGLIS