Gene Sde_1578 details

Gene Information

• Locus tag: Sde_1578
• Symbol: infC
• ID: 3965108
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Saccharophagus degradans 2-40
• Kingdom: Bacteria
• Replicon accession: NC_007912
• Strand: +
• Start bp: 2029145
• End bp: 2029693
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637920658
• Product: translation initiation factor IF-3
• Protein accession: YP_527052
• Protein GI: 90021225
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0290] Translation initiation factor 3 (IF-3)
• TIGRFAM ID: [TIGR00168] translation initiation factor IF-3

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 21
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGACCATTA GCAATCGTGA TAATGCCAAA GGGCGTTCAA AAAAAGCGAC TATCAACGAC 
CAAATTGAAG CGAAAGAAGT ACGATTAATT GGCGCGGATG GCGAACAAGT TGGGATCGTA 
CCCATCGCAG AAGCTCTAGC AACTGCGCAA GCTGCAACAC TAGATTTGGT ACTAATAGCC 
GCTGATGCAG ACCCCGTGGT CTGTAAAATC ATGGATTATG GTAAGCACCT TTTCGAAGCG 
AAAAAAGCAA AAGCTGCTGC TAAAAAGAAA CAAAAGCAGC AACAAGTTAA GGAAATGAAG 
TTTCGCCCCG GCACTGAAGA GGGCGATTAC AAGGTAAAGT TAAAAAACTT GCAGCGTTTC 
CTTGAGCAAG GCGACAAAGC AAAAGTTTCC CTGCGCTACC GCGGTCGAGA AATGGCTCAC 
CAAGAGTTAG GCATGGAGAT GATGAAGCGA ATAGAAGTGG ATCTTGCAGA AATAGGTACT 
GTTGAACAGT ACCCAAAAAT GGAAGGTCGC CAGCTAATAA TGGTTATCGC TCCTAAGAAG 
AATCGCTAA 

 

Protein sequence

MTISNRDNAK GRSKKATIND QIEAKEVRLI GADGEQVGIV PIAEALATAQ AATLDLVLIA 
ADADPVVCKI MDYGKHLFEA KKAKAAAKKK QKQQQVKEMK FRPGTEEGDY KVKLKNLQRF 
LEQGDKAKVS LRYRGREMAH QELGMEMMKR IEVDLAEIGT VEQYPKMEGR QLIMVIAPKK 
NR