Gene Sde_1566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1566 
Symbol 
ID3965094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2009849 
End bp2010367 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content42% 
IMG OID637920644 
Producthypothetical protein 
Protein accessionYP_527040 
Protein GI90021213 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACAG ATACCTTTGC CATGAAAAAA AGAAACGCAT TAATTGTAAT AGCATTTATT 
TTGCTAGCGG GATTACAGCT TTCTACCAGT GCAAGAGCCA CCCCTGCACC GGCTTTCACC
CTGCCAGAAA TTCATTCTAT GGAGTCGCTC TCCCTTGCGG ACTACCAAGG CAAAGTTATT
TATTTAGATT TTTGGGCGAG TTGGTGCGGC CCCTGCAGAA AAAGCCTACC GCTTATGAAC
GAAGTGTACA AACGACTCGA AGACAAAGGC TTTATGGTGA TAGCAATTAA TCTGGATGAA
AATCGAGAGC TTGGGCTTAA ATTTCTAGAA AACCAGCCGC TCGACTACCC AATAGTGTTT
GACAAAACTA AATCTGTACC AGGCAAGTAT CAACTAGAAG CCATGCCAAG CGCCTACCTT
ATCGATAAAA AAGGCACCAT TCGCGCTATA CATAAAGGTT TTAAAGAAAA GGACCTAAGC
AAAATAGAAA CACAAATTAC CTTTCTGTTG GATGAGTAA
 
Protein sequence
MHTDTFAMKK RNALIVIAFI LLAGLQLSTS ARATPAPAFT LPEIHSMESL SLADYQGKVI 
YLDFWASWCG PCRKSLPLMN EVYKRLEDKG FMVIAINLDE NRELGLKFLE NQPLDYPIVF
DKTKSVPGKY QLEAMPSAYL IDKKGTIRAI HKGFKEKDLS KIETQITFLL DE