Gene Sde_1564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1564 
Symbol 
ID3965092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp2008423 
End bp2009565 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content46% 
IMG OID637920642 
Producthypothetical protein 
Protein accessionYP_527038 
Protein GI90021211 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACAG CCACTCAACT ACTCTTAGCA AGTGCAATGT CGTTACCAGC CTTGGCCCAT 
GCAGCTACTG CACCAACAGA TAGGGTAATA GACTACAAAT ACACCAGCTA TAGCGAAGAT
GACATAGCCA AAGATGTCGA ACTGTTGCTT GGCGACAAAA GCCGGTACTC CATAGATGTG
CACCAAGTTA GATTTGTTGC GCCTTTAAAC GATGAAACCA GCATTGAAAT AAATTCTGTT
ACCGAATCTT TATCTGGCGC TTCGCCATGG GGCACCAGCC AAGGCACAGA TAACAACGCG
GCACTAGTAA TGAGTGGTGC GAGCATTGTG GAAGAGCGCA GTGATTTTAA CGTTACAATT
TCACGCTTTT TATCCAATCA CAGTTGGAGT GTTAACTTGG GGTCTTCGCA GGAAAACGAC
TACTCATCCA TGTATATGGG CACAGGCCAC GAGTGGACTT TCAACAAAAA GAATACCGCG
ATTGCCATGG GTGCATCTTT TTCTTTAGAT GCCCTACACC CGTCGGATGC GGAAGAGTAT
CAGCGCGTGG TATCCGAAAA TAAGCAGACT GTTTCTGGTT TTCTAGGCTT TTCTCAAAAC
CTCACAGCAA AAACCGTAGT GCAAATTGGC GCTAGCTACA CCATTAACCA AGGGTTTCTG
AGCGACCCCT ACAAACTGAA TGATCGCCGC CCAAGTAGTA AATCGTCGGC CACGGCCAAT
ATAGCTTTAC GTCAATTTAT AGAAACTGCG AATGCGGCCA TGCATATAGA TTACCGCTAC
TATACAGACT CTTGGCAAAC CCAATCCCAC ACGATGGAAG CAAGCTGGGT GCAAAACATT
GGCGATCATA CGCAACTAAC ACCTACTGCA CGCTACTACT TTCAAACGGA AGCTTCCTTT
TACGAACCAT ACGAAGTTTC TACCAACAAA ATGGAATTTA TCTCTAGTGA CTACCGCCTT
TCGCCCTATG GCGCGCTCTC TTTCGGTGTA AAGCTGGAGC AGTTTTGGCG AAACTTTTCG
TACGACATCT CGTTTATTTA TTACCAATCG GATGCCGATT TTTCACCGCA AACAGTACTA
ATAGAAAACC CTGGCCTGGT ATCGTTCACC GCCACTTCAC TGGGCTTGCG CTATACATGG
TAA
 
Protein sequence
MNTATQLLLA SAMSLPALAH AATAPTDRVI DYKYTSYSED DIAKDVELLL GDKSRYSIDV 
HQVRFVAPLN DETSIEINSV TESLSGASPW GTSQGTDNNA ALVMSGASIV EERSDFNVTI
SRFLSNHSWS VNLGSSQEND YSSMYMGTGH EWTFNKKNTA IAMGASFSLD ALHPSDAEEY
QRVVSENKQT VSGFLGFSQN LTAKTVVQIG ASYTINQGFL SDPYKLNDRR PSSKSSATAN
IALRQFIETA NAAMHIDYRY YTDSWQTQSH TMEASWVQNI GDHTQLTPTA RYYFQTEASF
YEPYEVSTNK MEFISSDYRL SPYGALSFGV KLEQFWRNFS YDISFIYYQS DADFSPQTVL
IENPGLVSFT ATSLGLRYTW