Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1564 |
Symbol | |
ID | 3965092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 2008423 |
End bp | 2009565 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637920642 |
Product | hypothetical protein |
Protein accession | YP_527038 |
Protein GI | 90021211 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACAG CCACTCAACT ACTCTTAGCA AGTGCAATGT CGTTACCAGC CTTGGCCCAT GCAGCTACTG CACCAACAGA TAGGGTAATA GACTACAAAT ACACCAGCTA TAGCGAAGAT GACATAGCCA AAGATGTCGA ACTGTTGCTT GGCGACAAAA GCCGGTACTC CATAGATGTG CACCAAGTTA GATTTGTTGC GCCTTTAAAC GATGAAACCA GCATTGAAAT AAATTCTGTT ACCGAATCTT TATCTGGCGC TTCGCCATGG GGCACCAGCC AAGGCACAGA TAACAACGCG GCACTAGTAA TGAGTGGTGC GAGCATTGTG GAAGAGCGCA GTGATTTTAA CGTTACAATT TCACGCTTTT TATCCAATCA CAGTTGGAGT GTTAACTTGG GGTCTTCGCA GGAAAACGAC TACTCATCCA TGTATATGGG CACAGGCCAC GAGTGGACTT TCAACAAAAA GAATACCGCG ATTGCCATGG GTGCATCTTT TTCTTTAGAT GCCCTACACC CGTCGGATGC GGAAGAGTAT CAGCGCGTGG TATCCGAAAA TAAGCAGACT GTTTCTGGTT TTCTAGGCTT TTCTCAAAAC CTCACAGCAA AAACCGTAGT GCAAATTGGC GCTAGCTACA CCATTAACCA AGGGTTTCTG AGCGACCCCT ACAAACTGAA TGATCGCCGC CCAAGTAGTA AATCGTCGGC CACGGCCAAT ATAGCTTTAC GTCAATTTAT AGAAACTGCG AATGCGGCCA TGCATATAGA TTACCGCTAC TATACAGACT CTTGGCAAAC CCAATCCCAC ACGATGGAAG CAAGCTGGGT GCAAAACATT GGCGATCATA CGCAACTAAC ACCTACTGCA CGCTACTACT TTCAAACGGA AGCTTCCTTT TACGAACCAT ACGAAGTTTC TACCAACAAA ATGGAATTTA TCTCTAGTGA CTACCGCCTT TCGCCCTATG GCGCGCTCTC TTTCGGTGTA AAGCTGGAGC AGTTTTGGCG AAACTTTTCG TACGACATCT CGTTTATTTA TTACCAATCG GATGCCGATT TTTCACCGCA AACAGTACTA ATAGAAAACC CTGGCCTGGT ATCGTTCACC GCCACTTCAC TGGGCTTGCG CTATACATGG TAA
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Protein sequence | MNTATQLLLA SAMSLPALAH AATAPTDRVI DYKYTSYSED DIAKDVELLL GDKSRYSIDV HQVRFVAPLN DETSIEINSV TESLSGASPW GTSQGTDNNA ALVMSGASIV EERSDFNVTI SRFLSNHSWS VNLGSSQEND YSSMYMGTGH EWTFNKKNTA IAMGASFSLD ALHPSDAEEY QRVVSENKQT VSGFLGFSQN LTAKTVVQIG ASYTINQGFL SDPYKLNDRR PSSKSSATAN IALRQFIETA NAAMHIDYRY YTDSWQTQSH TMEASWVQNI GDHTQLTPTA RYYFQTEASF YEPYEVSTNK MEFISSDYRL SPYGALSFGV KLEQFWRNFS YDISFIYYQS DADFSPQTVL IENPGLVSFT ATSLGLRYTW
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