| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1533 |
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| Symbol | |
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| ID | 3965061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1977562 |
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| End bp | 1978059 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637920611 |
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| Product | hypothetical protein |
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| Protein accession | YP_527007 |
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| Protein GI | 90021180 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGAGAA TACGAACAGA TTTACCGGTG TTGCCTTCTC TATTGGATCG TTTAATTGAC
GATGATCCGG ATAGAAGTTT GGAGGCGGTA AAACCCGCAG GAGTTGTGTT GGCAGATATA
AAAGCAAACA TTCGTCGGGA CCTCGAAAAT CTGTTGAATA CTCGCATTTA TCGCCAGCTA
AGTATTGATG CTTACCCAGA GCTACAAAAG TCGCTTGTTA ACTACGGAAT AAAAGATTTT
AGTCATGTTC AGTTTGATTC GGATGAAGAG CGAATACAGT TTGCTTGGTC TATTCGTCGA
GCTATTGAAG ACTACGAGCC GCGATTTCAA TGGGTGCAAG TTGATATAGA GCCATTTGGT
GAAGATTTTC AGCGAACCTT ATATTTAAAA ATATCTGCAA CATTGTTAAT AGAGCCAGAC
CCAGTGCCCC TAATATTTGA TTCAAGAGTT CGTACAACCG ATAGAGCCCT CAAGTTGAGG
GAGGTAAATC ATGGATGA
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| Protein sequence | MARIRTDLPV LPSLLDRLID DDPDRSLEAV KPAGVVLADI KANIRRDLEN LLNTRIYRQL
SIDAYPELQK SLVNYGIKDF SHVQFDSDEE RIQFAWSIRR AIEDYEPRFQ WVQVDIEPFG
EDFQRTLYLK ISATLLIEPD PVPLIFDSRV RTTDRALKLR EVNHG
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