| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1526 |
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| Symbol | |
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| ID | 3965054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1967820 |
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| End bp | 1969016 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637920604 |
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| Product | FHA domain-containing protein |
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| Protein accession | YP_527000 |
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| Protein GI | 90021173 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3456] Uncharacterized conserved protein, contains FHA domain |
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| TIGRFAM ID | [TIGR03354] type VI secretion system FHA domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTAC GAATAGATGT AAAAAATCAT GATGCATTGG ATACGAATGC ACCTAAATTT
ACTTTGTTTG GGATGGATGG CGGCAAGCTA GGAAGAAGCT CTGAGTGCGA ATTATATTTA
CCTTGCGAGG AAAAATCCGT ATCGAGAGTG CATGCAGAAA TTCGCTTGGA AGACTGCGCA
TTTTTATTAA TAGACCGTAG CATTAACGGC GTTTATATCA ACAAATCTAA CGAGCCCTTA
GGTATGGGCA AGCGCCACCC AATAAAACAC GGCGATGTAT TTCAAATTGG AAACTATGAA
TTAGAAGCCA ATTTTGATGT GGAAGAAGAC GATATACCAG CTTTTGCACC AAGTACAAAT
CAAGCTAATA TTGTTTTAGA CAATAACGCA GTTACAACCC AACCCGCCAC ATCGGACATA
GCCGATGCCC GTATTGATTT TGGCTCGACC ACCGATCAAT TCACACCACC CACGACTATT
ATACCCAAGG ACTGGGACCT AGATTTAGCA TCCCCCGAAC TACCTGCCGC AAAACCGGAA
AAAGCCCAAG TTATAGATTT TTCTAACAAA AAATCAAAAC TAATAGAAAG CCTACTTAGC
GGGCTAGCAC CCGAGTCGAA ATTCACCGCA GACCAAATAA CTCCCGAAAC GGCCCAGTTG
TTAGGCAAGG CATTACGCAT TTCGCTGATG GGCGCTGTCG CGCAGCGACG TGTATTACAA
GAGGCTAAAA GCAAAGCTTG CCTAGACGAA ATACCCACTG AACGCCAAAT GGAAGCAGAC
GCTTTGGGCA GCTTTCCAAA CGCGGATTCA ATTATTGAAG CACTACTAGA TACAAGGCAT
CGGGATCAGA AAAAAATACC GTCACTGCTA AGTGCAACAC TTAAATACAA CTTGGAAGAT
CAAATCGAGC TCAACGCGGG CTATCAAGCA GCAATAACTA AAGCACAACA GTGTTTAGCC
CCCGTGGAAA TCGAAAAGGC ACTAGAAAAA GCTCACAAGG CACACGCTCA AAAAAATAGC
GCGATAGAAA GCCTTAGTAG TAAATTTATG TCGCAATCTA AAAAGTGGAG TTTCTACACC
GCAAATTGGG CAAAAATTTG CGAGAAAGCT AGCGCTCAAA TAGGTAAAGA CTTTGAAACT
AAAACGCTGC TAGCCCACGC AAAACGTATG CGGGATAAAA ACAATGCAAC CAAATAA
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| Protein sequence | MALRIDVKNH DALDTNAPKF TLFGMDGGKL GRSSECELYL PCEEKSVSRV HAEIRLEDCA
FLLIDRSING VYINKSNEPL GMGKRHPIKH GDVFQIGNYE LEANFDVEED DIPAFAPSTN
QANIVLDNNA VTTQPATSDI ADARIDFGST TDQFTPPTTI IPKDWDLDLA SPELPAAKPE
KAQVIDFSNK KSKLIESLLS GLAPESKFTA DQITPETAQL LGKALRISLM GAVAQRRVLQ
EAKSKACLDE IPTERQMEAD ALGSFPNADS IIEALLDTRH RDQKKIPSLL SATLKYNLED
QIELNAGYQA AITKAQQCLA PVEIEKALEK AHKAHAQKNS AIESLSSKFM SQSKKWSFYT
ANWAKICEKA SAQIGKDFET KTLLAHAKRM RDKNNATK
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