Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1484 |
Symbol | |
ID | 3965221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1910635 |
End bp | 1911108 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637920561 |
Product | hypothetical protein |
Protein accession | YP_526958 |
Protein GI | 90021131 |
COG category | [S] Function unknown |
COG ID | [COG4103] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0056262 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.976718 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTTCAC ACATCAAATC TTTCTTTCAA ACCGAGTTTT TTAATATTCT CGACGGTCAA GATGAGTCTG ACCAAATAAC CCTTAGTGAA GATAAGCGCC AGCTCGCCTG CGCAGCGCTA CTAATTGAAG TGGCAATTGT GGATAACGAG TTCGATCAAG AGGAGTTTAA CGCCCTACAG GCTATTTTAG AGTCTGACTT TGGCGTTACT GAGGACCAGT GCAAAACCCT CACCACCCTT GCCCAGCAAG AGTGCGAAGC CGCAACCTCT ACCTACCAAT TCACACAATT AGTGAATAAC CACTGCACCG CAGAAGACAA ATTCAGCCTA ATAAAAGGGA TGTGGACTAT TGCCTATGCC GATGGCGATT TAGACAAGTA CGAAGAGTAC GTTATTCGCA AGGTGTCAGA TTTGATTCAC GTGTCCCACG CAGACTTTAT ACGCGCCAAA ATTGAAGCCC GTCCCGACAA CTAG
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Protein sequence | MISHIKSFFQ TEFFNILDGQ DESDQITLSE DKRQLACAAL LIEVAIVDNE FDQEEFNALQ AILESDFGVT EDQCKTLTTL AQQECEAATS TYQFTQLVNN HCTAEDKFSL IKGMWTIAYA DGDLDKYEEY VIRKVSDLIH VSHADFIRAK IEARPDN
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