Gene Sde_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1484 
Symbol 
ID3965221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1910635 
End bp1911108 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content46% 
IMG OID637920561 
Producthypothetical protein 
Protein accessionYP_526958 
Protein GI90021131 
COG category[S] Function unknown 
COG ID[COG4103] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0056262 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.976718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTTCAC ACATCAAATC TTTCTTTCAA ACCGAGTTTT TTAATATTCT CGACGGTCAA 
GATGAGTCTG ACCAAATAAC CCTTAGTGAA GATAAGCGCC AGCTCGCCTG CGCAGCGCTA
CTAATTGAAG TGGCAATTGT GGATAACGAG TTCGATCAAG AGGAGTTTAA CGCCCTACAG
GCTATTTTAG AGTCTGACTT TGGCGTTACT GAGGACCAGT GCAAAACCCT CACCACCCTT
GCCCAGCAAG AGTGCGAAGC CGCAACCTCT ACCTACCAAT TCACACAATT AGTGAATAAC
CACTGCACCG CAGAAGACAA ATTCAGCCTA ATAAAAGGGA TGTGGACTAT TGCCTATGCC
GATGGCGATT TAGACAAGTA CGAAGAGTAC GTTATTCGCA AGGTGTCAGA TTTGATTCAC
GTGTCCCACG CAGACTTTAT ACGCGCCAAA ATTGAAGCCC GTCCCGACAA CTAG
 
Protein sequence
MISHIKSFFQ TEFFNILDGQ DESDQITLSE DKRQLACAAL LIEVAIVDNE FDQEEFNALQ 
AILESDFGVT EDQCKTLTTL AQQECEAATS TYQFTQLVNN HCTAEDKFSL IKGMWTIAYA
DGDLDKYEEY VIRKVSDLIH VSHADFIRAK IEARPDN