Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1478 |
Symbol | |
ID | 3965215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1900885 |
End bp | 1904757 |
Gene Length | 3873 bp |
Protein Length | 1290 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637920555 |
Product | phosphoribosylformylglycinamidine synthase |
Protein accession | YP_526952 |
Protein GI | 90021125 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain [COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR01735] phosphoribosylformylglycinamidine synthase, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.704135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATCC TGCCTGGCGC TCCCGCCCTG TCTGATTTTC GACTTCAAAA ACTTTTACAG CGTTGCACCG ATTTAGGTAT AGCCGTTACC GGCTTAAGCG CAGACTACGT GCACCTTATC GATGTGGAGA GCGAACTTAG CCAAGATGAG CACGAAACAT TGGTTAAATT GCTTACTTAC GGGCCTAAAA TTGAGGCCGC AAGCGTAGAA GGGGTAGAGC TAGTTGCTGT ACCGCGCCCA GGCACAATAT CTCCGTGGTC CTCTAAGGCA ACAGATATCG CTAAAAATGC AGGTCTTACC AAGGTACGTC GCATTGAGCG CGGTATTCAT TACCGTATTG CCGCAGGTGC CAGCCAAGCC GCACTAGAGC AAATTAAGCC ACTGCTATTT GACCGCATGG TGGAATCGTT ATTAAACAGC CCCGAAGAGG GCGCTGCTTT ATTCCGCGCA GAGTCTCCTA AGCCTTTAAG CTACGTAGAT ATTCTTGGTG CTGGCCGCCA AGCGTTGGTA GAAGCTAACG GTACTTTAGG TTTGGCGCTT GCCGAAGATG AAATAGATTA CCTTGTTGAA TCGTTCGAAG GCTTGGGCCG CAACCCTACC GATGTAGAGC TGATGATGTT TGCTCAAGCG AACTCCGAGC ATTGCCGCCA CAAAATATTC AATGCGAGCT GGACTATCGA TGGCAAAGAA ATGCCGCGCT CACTGTTTAA AATGATCAAA AACACCTACG AACTCGGTGG CGAAAACGTA TTGTCTGCCT ATGCAGATAA CGCCTCTGTA GTAACCGGTA GTGTAGCGGG GCGATTTTTC CCCAACCCAG AAACTAAAAC GTTTGCTTAT ACCGAAGAGC CAATTCATCT GTTGATGAAA GTGGAAACGC ATAACCACCC AACTGCCATT GCGCCTTTCC CTGGTGCGGG TACTGGTTCG GGGGGCGAGA TTCGCGACGA GGGTGCAGTT GGTAAAGGCT CTAAGCCAAA GGCGGGCTTG AGCGGCTATA CCGTATCGAA CTTACAAATT CCAGATTACA CCTTGCCTTG GGAAACCCCC TACGGCAAAC CCGATCGCAT TGTGAACGCG CTAGATATTA TGATTGAAGG CCCAATAGGC GGCGCTGCGT TTAACAATGA GTTTGGTCGC CCGAATATCT GTGGTTACTT CCGTACCTTT GAAGAAGACT TCGACGGCGA GCGTCGTGGT TACCACAAGC CCATCATGTT GGCCGGTGGT TACGGCAATA TTCGCGAAGA ACATATTGCG CAAACCGAAT ACGATGCGGG CAGTAAGCTG GTTGTATTGG GCGGCCCAGC TATGTTGATT GGCTTAGGCG GTGGTGCTGC ATCTTCTATG GCATCTGGTA GCTCTAGCGA AGATCTCGAT TTTGCGTCGG TACAGCGCCA AAACCCAGAA ATTGAACGTC GTTGCCAAGA AGTGATCGAC CAATGCTGGC AGCTAGGTGA AAATAACCCA ATCGCCTTTA TTCACGATGT GGGTGCAGGT GGTTTATCTA ACGCCTTCCC AGAGCTTGCT AAAGATGGTG GCTGCGGTGC AATTTTTGAT ATCCGTAAAG TGCCTAACGA CGAGCCAGGT ATGTCGCCAT TAGAAATATG GTGTAACGAA TCGCAAGAGC GTTACGTAAT GGCTATACCG CCAGAGCGTT TAGCCCAATT CGAGGCGATT TGTGAGCGTG AGCGTTGCCC TTACGCCGTT GTGGGCGAAG CAATAAGCGA GCAAACACTG CAGGTAAAAG ACACCCTATT GAATGCAAAC CCAGTCGACC TGCCTATGAG TGTGTTGTTT GGCAAAGCGC CTAAAATGCA CCGCACAGCA GAAACACGCA CCTATAACAC GCCAGAATTT GATATTACTG GTTTAAGTGT ACAAGACGCT GCCGAGCGCG TTATTCAGCA CCCAGCAGTG GCAAGTAAGC AGTTCCTTAT TACAATTGGT GACCGCTCCG TAACCGGTCA GGTTGTGCGC GATCAAATGG TAGGCCCGTG GCAAGTGCCC GTGGCAGACT GCGCGGTAAC TACAGTAAGT TACGATAGCT TCGCTGGTGA AGCTATGAGC ATGGGCGAGC GTACGCCGCT GGCGCTTATT GATGCTCCCG CTTCTGGTCG CATGGCGGTG GGCGAAGCCA TTACAAACAT TGCCGCCACC CGTATTGGCG ACATAAAAGA TATTAAACTT TCAGCCAACT GGATGTGTGC TGCAGGCCAC CCAGGTGAAG ATGCCAAGCT ATACGAGACC GTAGAAGCTG TAGGTATGGA TATTTGCCCA GCGTTGGGCT TAACCATTCC TGTGGGTAAA GACTCCATGT CTATGCGTAC CGCATGGCAG GAAAACGGCG AAGATAAATC GGTAACCTCA CCGCTATCTG TAGTCATTTC TGCTTTTGCG CCCGTTGTCG ATGTGCGCAA AACACTTACT CCCGAATTAA AAACCGTAGC CAACAAAATA CTACTTGTAG ACCTCGCTGC AGGTGAGCAG CGTTTAGGCG GTTCTATACT GGCGCAGGTG TACAATCAAA TAGGCACCGG CGCGCCCGAT GTCGATAACG CCGCTAGCTT AAAAGCGTTT TTTAACGCAA TGCAGGCGTG TTTAGAGCAA GACTTGCTAC TTGCCTATCA CGATCGCAGC GATGGTGGCT TATATGCAGC CTTAGCTGAA ATGTGTTTTG CTGGCCGCTG CGGCGCCACA GTAGATATTG CCGCTCAAGT AGCGAACGGC TCTGAATTAG GTGCCTTGTT TAACGAAGAG TTGGGCGCGT TGCTGCAAGT TGCTAGCGAT AAACTGGCTA CAGTAGAAGC TATATTCGAG CAGCACGGCT TGGGTACATC GCTTAGCGTA TTAGGTGAAG CTACCGCCAA TGAAAATATT ATTTTCAATA ATGGTGATGC AACGGTACTT AATCAAACGC GTGCAGCACT GCAAAAACTG TGGAGCCTGA CGAGTTACAA CGTGCAAAAG CTGCGCGATA ACCCAGAGTG TGCCGAGCAA GAATTTGCCG CAATAGAAGC TAAGAATACA GGCTTAATAA ACAAACTAAG CTTCGACCCG CAACAAGATA TTGCTGCACC TTATATTGCC AAAGGCGTTA AGCCTAGCGT TGCAATTTTA CGTGAGCAGG GTGTAAACAG CCAAAACGAA ATGGCTGCAG CATTTGACCG CGCAGGCTTT AGCGCCGTAG ACGTTCATAT GAGCGATATC CTAAGTGGTC GTGTTAGCTT AGAGCAATTT AAAGGCCTAG CCGCTTGCGG TGGTTTCTCT TACGGTGACG TACTGGGTGC CGGCGAAGGT TGGGCAAAAA CCATTTTGTT TAATGCCCAA GCGCGCGATC AATTCCAAGC GTTTTTTAAC CGCGAAGATA CCTTCAGTTT AGGTGTGTGT AACGGTTGCC AAATGCTCTC TAACTTGAAG AGCTTAATTC CTGGTACCGA GCTGTGGCCA CATTTCGTGC GCAACGTATC GGAGCAGTTC GAAGCGCGCT TTAGCTTAGT TAAAGTAGAG CAGTCTGCTT CTGTATTGCT AGGTGATATG GCAGGCTCTT ATTTGCCTGT TGCTGTATCT CACGGTGAGG GTCGTGCCGA GTTTGCCAAT AGCGCTGCTG TAAGCGCCTT AGAAAGCTCT GGCACCGTTG GTATGCGCTT TGTTACTTCC GACCTTGCAA CCGCAACCAC TTACCCGGCC AACCCCAATG GTTCGCCTAA CGGCATTACA GGGTTGTGTT CGGCAGAAGG TCGCACCACT ATTATGATGC CGCACCCAGA GCGTGTTTTC CGCAAAGTTA CAAACTCGTG GAATGATGGC GAAGCAGGCG AGTACAGCGG TTGGATGCGA TTATTCCGCA ACGCGAGAGT ATTTGTAGAT TAA
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Protein sequence | MLILPGAPAL SDFRLQKLLQ RCTDLGIAVT GLSADYVHLI DVESELSQDE HETLVKLLTY GPKIEAASVE GVELVAVPRP GTISPWSSKA TDIAKNAGLT KVRRIERGIH YRIAAGASQA ALEQIKPLLF DRMVESLLNS PEEGAALFRA ESPKPLSYVD ILGAGRQALV EANGTLGLAL AEDEIDYLVE SFEGLGRNPT DVELMMFAQA NSEHCRHKIF NASWTIDGKE MPRSLFKMIK NTYELGGENV LSAYADNASV VTGSVAGRFF PNPETKTFAY TEEPIHLLMK VETHNHPTAI APFPGAGTGS GGEIRDEGAV GKGSKPKAGL SGYTVSNLQI PDYTLPWETP YGKPDRIVNA LDIMIEGPIG GAAFNNEFGR PNICGYFRTF EEDFDGERRG YHKPIMLAGG YGNIREEHIA QTEYDAGSKL VVLGGPAMLI GLGGGAASSM ASGSSSEDLD FASVQRQNPE IERRCQEVID QCWQLGENNP IAFIHDVGAG GLSNAFPELA KDGGCGAIFD IRKVPNDEPG MSPLEIWCNE SQERYVMAIP PERLAQFEAI CERERCPYAV VGEAISEQTL QVKDTLLNAN PVDLPMSVLF GKAPKMHRTA ETRTYNTPEF DITGLSVQDA AERVIQHPAV ASKQFLITIG DRSVTGQVVR DQMVGPWQVP VADCAVTTVS YDSFAGEAMS MGERTPLALI DAPASGRMAV GEAITNIAAT RIGDIKDIKL SANWMCAAGH PGEDAKLYET VEAVGMDICP ALGLTIPVGK DSMSMRTAWQ ENGEDKSVTS PLSVVISAFA PVVDVRKTLT PELKTVANKI LLVDLAAGEQ RLGGSILAQV YNQIGTGAPD VDNAASLKAF FNAMQACLEQ DLLLAYHDRS DGGLYAALAE MCFAGRCGAT VDIAAQVANG SELGALFNEE LGALLQVASD KLATVEAIFE QHGLGTSLSV LGEATANENI IFNNGDATVL NQTRAALQKL WSLTSYNVQK LRDNPECAEQ EFAAIEAKNT GLINKLSFDP QQDIAAPYIA KGVKPSVAIL REQGVNSQNE MAAAFDRAGF SAVDVHMSDI LSGRVSLEQF KGLAACGGFS YGDVLGAGEG WAKTILFNAQ ARDQFQAFFN REDTFSLGVC NGCQMLSNLK SLIPGTELWP HFVRNVSEQF EARFSLVKVE QSASVLLGDM AGSYLPVAVS HGEGRAEFAN SAAVSALESS GTVGMRFVTS DLATATTYPA NPNGSPNGIT GLCSAEGRTT IMMPHPERVF RKVTNSWNDG EAGEYSGWMR LFRNARVFVD
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