Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1458 |
Symbol | |
ID | 3966175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1881381 |
End bp | 1882745 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637920535 |
Product | exodeoxyribonuclease VII large subunit |
Protein accession | YP_526932 |
Protein GI | 90021105 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1570] Exonuclease VII, large subunit |
TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAACG ATATTTTTAG CCAAACCAAC CAAATTACAG CCAAGCGTGG CGGCGAGCGC AAAACTTTTT CTGTGGAAGA GCTTAACCGC AGAGTAAAAG ACCTGCTTGA AGTACACCTG CCCCTTATTT GGGTAGAAGG TGAAATTTCT AACTTTAGCG CCCCTGCCTC TGGCCACTGG TACTTCACCC TAAAAGACGA GCGCGCACAG GTGCGCTGTG CCATGTTTAA GGGCCGCAAC CAGCAGGTAA AATTTCGCCC AAAAGCGGGC GATAAAGTGC TGCTGCGCGC CCGCGTAAGC CTGTATGAGG GTCGCGGCGA TTTTCAGCTT ATTGCCGAGC ACATGGAAGA GTCTGGGTTT GGCCTATTAC AACAGCGTTA CGAAGCCCTA AAAGCACAGT TACTAAATGA AGGCCTGTTT AACGAGGCAG ATAAACAACC GATTCCCACA CTGCCAAACC ATATAGGCAT TATCACATCG CCCACAGGGG CTGCCGTGCG GGATGTACTA TCGGTATTAC AGCGCCGCTT CCCCAGTATT CCGGTAACGG TGATCCCTGC CCCTGTGCAA GGGGATGACG CGCCCGCAAA ACTCATACAG GCAATAGACA TTGCCGAGAA TTCAGGCCTT TTTGATGTGC TTTTGCTGTG CCGCGGCGGC GGCTCGATAG AAGACTTATG GGCCTTTAAC AATGAAGCGC TGGCGCGCCG CATTTACGAA TGCGATATAC CCATTGTGAG CGCAGTGGGT CACGAGGTAG ATTTTACCAT TGCCGACTTT GTTGCAGATT TACGCGCCCC CACCCCTTCG GCTGCGGCTG AACTGCTGTG CCCAAACAAA ACAGATATCG ACCAATTGCT ACAACATTTT GCCAAGCAGC TTAAACAGCG CCTACACCAG CGTTTAAGCC AATACGCTCA GGCAGTAAAT CACCTGCGCA CAAGGCTAAA GCACCCTGGC GAGCGCCTAA ATGCGCGAGC GCAACAATTG GATCAATTAG AAATTCGTCT TACCCGCGCC ATACAGTTGC GCTTACAAAA AGACGGCACC ACACTTAGAA ACCGCGAGCA GCGCTTAACC CAGCAGCACC CTCAAAAGTT GCTTGCGCAG CATCAAAAAG ATCTCGCAAA ACTTCGCTTA CAATTAAACC AAGCCATTAG CCGTTTGCTA GATAAAAAAA CAGACAGACT GCAAAGAGCC GTTGCACTGC TTGATATTGC TAGCCCCCTG GCAACCCTTA AGCGCGGCTA CTCCATAACG ACTAAGGCTG ACGGCACGGT TATACGCACG CCGGCCGACA CCCCAAAAGG CGAAACCATT CATATTAAGC TTGCCGAGGG TGAACTATCC GCAAAAATTA ACTAG
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Protein sequence | MQNDIFSQTN QITAKRGGER KTFSVEELNR RVKDLLEVHL PLIWVEGEIS NFSAPASGHW YFTLKDERAQ VRCAMFKGRN QQVKFRPKAG DKVLLRARVS LYEGRGDFQL IAEHMEESGF GLLQQRYEAL KAQLLNEGLF NEADKQPIPT LPNHIGIITS PTGAAVRDVL SVLQRRFPSI PVTVIPAPVQ GDDAPAKLIQ AIDIAENSGL FDVLLLCRGG GSIEDLWAFN NEALARRIYE CDIPIVSAVG HEVDFTIADF VADLRAPTPS AAAELLCPNK TDIDQLLQHF AKQLKQRLHQ RLSQYAQAVN HLRTRLKHPG ERLNARAQQL DQLEIRLTRA IQLRLQKDGT TLRNREQRLT QQHPQKLLAQ HQKDLAKLRL QLNQAISRLL DKKTDRLQRA VALLDIASPL ATLKRGYSIT TKADGTVIRT PADTPKGETI HIKLAEGELS AKIN
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