Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1446 |
Symbol | |
ID | 3966163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1870866 |
End bp | 1871984 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637920523 |
Product | hypothetical protein |
Protein accession | YP_526920 |
Protein GI | 90021093 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2706] 3-carboxymuconate cyclase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.30518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCAC TAGCAGGTTG TGGTGAAAAA AGTGAAGCCC CCAAGCCAGT AGCAGAAGAG CAAGGTACAG CAAAGCCTGC AGTGGTGGAA AGTCGATTTG CCATTGGTGG CTATACCGAT GGGCCTGGGC AAGGTGTAAA TGGTTTAAGC CTAAACCACG CCACCGGAGA GCTAACCAGC TTGGGCTTAT TGGCAGAAAC TGTGAACCCT TCTTACGTGG TGTTTAACGA AGACGCTACC GTAATGTACA CCGTAAACGA GAAAGAGCAC GGTGGCATAA GTGCGTTTAC CTTAAATACC ACCAACAAAA CATTTACTCT TACTGCAGCG ACACAAGGCG TGGCTTATGC GCCGTGTCAT ATTAGCTTAA GCCCCAACGG CAAGTTTATT GCTGTGGCGA ATTATATGTC GGGCGATGTG CAATTATTTT CCCGTGCGGC CGATGCAAAT TTAGCCTTAG TAAGCGCCCA GCAGCACACG GGTAAAGGCC CCAACGAAAG CAGGCAAGAA GCGCCGCACC CCCACTGGAT CAACTGGAGC CCAGATGGCA AGTTTGTATA CAGTGTCGAT TTGGGTATAG ATCAAATCAT TAAATACACG GTTACCGAGC AGGGCTTTAG CGCTGGCGAG CCGGCTATTA CCTTGCAAGG TGGCGATGGC CCACGCCATA TGGTGTTCCA TGCCAATAAA GATATTGCCT ATGTAGTGAA CGAGCTTTCC AACACTGTAG CAGTATTAAG CTATAACCCA GAAACAGGTG CGCTTACAGA AATGCAGCGC ATAGGCACCT TAGACCCGGC CTTTAGTGAG CACAGCCAAA CGGCGGCAAT TAAAGTATCA TCCGATCAGC GCTTTGTTTA CGCATCAAAC CGTGGCGCCA ATACCATAGC GGTGTTTGCC GTAGCTGCCG ACGGTCGCCT AACCTACGTG CACGAGCACG CTACCGAAGG CAAGTGGCCG CGCGATTTTA CCCTCACCAG TGATGGCAAG TACGTGTTAG TGGCTAACGA GCATTCCAGT ACTATTACAC TGCTAGCCCG CGATAGCGAA ACCGGCAAAC TCAGCTCTAC CGGTAAATCC ATTGCTACGC ATCGCCCAAC GGCAGTGGTT GAATTTTAA
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Protein sequence | MTALAGCGEK SEAPKPVAEE QGTAKPAVVE SRFAIGGYTD GPGQGVNGLS LNHATGELTS LGLLAETVNP SYVVFNEDAT VMYTVNEKEH GGISAFTLNT TNKTFTLTAA TQGVAYAPCH ISLSPNGKFI AVANYMSGDV QLFSRAADAN LALVSAQQHT GKGPNESRQE APHPHWINWS PDGKFVYSVD LGIDQIIKYT VTEQGFSAGE PAITLQGGDG PRHMVFHANK DIAYVVNELS NTVAVLSYNP ETGALTEMQR IGTLDPAFSE HSQTAAIKVS SDQRFVYASN RGANTIAVFA VAADGRLTYV HEHATEGKWP RDFTLTSDGK YVLVANEHSS TITLLARDSE TGKLSSTGKS IATHRPTAVV EF
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