| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1434 |
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| Symbol | ispG |
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| ID | 3966112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1852727 |
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| End bp | 1853839 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920511 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_526908 |
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| Protein GI | 90021081 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.934399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAATTTG AATCGCCAAT TAAACGAAGA AAGTCTCGCC AAATAATGGT GGGAGATGTT
GCTGTGGGTG GCGACGCCCC CATAACTATT CAGAGTATGA CCAACACCGA GACCACCGAT
GTGGAGGCCA CAGTTGCGCA AATCGAGCGT ATACAAATGG CCGGTGCCGA CATAGTGCGT
GTTTCTGTAC CTAGTATGGA TGCGGCCGAA GCCTTTGGTG CAATTCGTAA GCGTGTAAGC
ATTCCGTTGG TAGCAGATAT TCATTTCGAT TACCGCATTG CCTTGCGCGT AGCCGATTTA
GGTGTGGATT GCTTGCGTAT TAACCCAGGT AATATTGGCC GAGAAAAACG TATTCTCGCC
GTTGTTGATA AGGCGCGCGA TTTAAATATA CCTATTCGTA TAGGTGTAAA TGCCGGTTCC
CTAGAAAAAG ATTTGCAAAC CAAGTATGGC GAACCCACGC CAGATGCGTT GGTTGAATCA
GCATTGCGCC ATGTAGAAAT TTTAGATAAG TACGATTTTC AAAACTTCAA AGTTAGTGTT
AAAGCCTCAG ATGTTTTTAT GGCGGTGGCG GCTTATCGCA AACTGGCAAC GCAAATAGAG
CAACCACTGC ACTTAGGTAT TACCGAGGCA GGTGGCCTGC GTGGCGGTAC GGTTAAGTCT
TCAGTGGGTT TAGGTATGCT GTTAATGGAC GGCATTGGTG ACACTATTCG CGTATCGCTT
GCAGCCGATC CTGTAGAAGA AGTAAAAGTA GGGTGGGACA TATTAAAAAG TTTAAAGCTG
CGCTCTAAGG GCATTAATTT TATTGCCTGC CCAAGTTGTT CGCGTCAAAA CTTTGATGTG
ATAAAAACCA TGAACGAACT AGAAATGCGC CTTGAAGATA TCACTACGCC GTTAGATGTG
GCAGTAATAG GTTGCGTGGT AAATGGCCCA GGCGAAGCTA AAGAGGTGGA TGTGGGCTTG
GCCGGTGGTA CGCCTAAAAA CTTAGTTTAT GTTAATGGTG TGCCCAGTCA GAAGTTTGAA
CAAGAGAACT TAGTTGATAG CCTAGAGCAA CTTATTCGTA AGCAGGCAGC TGAAAAAGAA
GCCAAAGAAA AAGATATTAT CGCCAAGGTG TAG
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| Protein sequence | MQFESPIKRR KSRQIMVGDV AVGGDAPITI QSMTNTETTD VEATVAQIER IQMAGADIVR
VSVPSMDAAE AFGAIRKRVS IPLVADIHFD YRIALRVADL GVDCLRINPG NIGREKRILA
VVDKARDLNI PIRIGVNAGS LEKDLQTKYG EPTPDALVES ALRHVEILDK YDFQNFKVSV
KASDVFMAVA AYRKLATQIE QPLHLGITEA GGLRGGTVKS SVGLGMLLMD GIGDTIRVSL
AADPVEEVKV GWDILKSLKL RSKGINFIAC PSCSRQNFDV IKTMNELEMR LEDITTPLDV
AVIGCVVNGP GEAKEVDVGL AGGTPKNLVY VNGVPSQKFE QENLVDSLEQ LIRKQAAEKE
AKEKDIIAKV
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