| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1409 |
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| Symbol | |
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| ID | 3968699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1826480 |
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| End bp | 1828537 |
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| Gene Length | 2058 bp |
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| Protein Length | 685 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920486 |
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| Product | Signal transduction histidine kinase-like |
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| Protein accession | YP_526883 |
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| Protein GI | 90021056 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTGGC TCAGCGAAGT AATAACAAGC CGCAAGCGGC AGCAGCGATC GTCACTTGGG
GCGCGTTTAC GGGCTATGCA AGAGGTTCGG CAAAGGTACG AACGGATATT TCGCGGTAGT
CACGGCTATG GTTTTGTGGA CTGGGACTTT AAAAACCGCA AAATGGATTG GAACGGTGGA
TTTTGGGCCT ATCTGGGGTA TGGCGAAACC GATATGGAGC ACATCTCTAG CCCGGGTCAG
TTTATGGAGT ATGTGCACAC AGATGATCGC GCGAAGGTTA ACAATTTTGT TCTGGGAGAG
TTAAAGGGCG TCGGGTCGGG CGAATTGGTG TTCCGTATCC GCAAAAAGAA AGGTGGATAT
ATTTGGGCTG AGGTGCGCGT AGATAATGTG CGCGATTCTC AGGGCCGAGT ATCGTTTATG
TCTGGCGTGG TATTTGATGT CACCAAGCAA AAGCAGACTG AGCAGGCGTT GCTTATTAGT
GAAGCGCGCC ATGCGCGAAT TATTCAGTCA TCGAATGACG GCATTTGGGA GTGGTCGGCA
GACCACGGGG GCTTCCAGTT CTCCAACCGC TGCTGGGAGC TGCTAGGGTA CGATCAGCAC
GATGACGAGC TCAACCAAGG AGTGGATAAA GTGCAGGCGT GGCGCGACCG CATGCACCCT
GAAGATGGTG AGTTATTCGA TAGAACCTTA GAAAAGCATA TCAAGGGCGA AGGCCCGTTT
GATGTTGAGT ATCGCATAAA AGGCAAAAAC GGCAATTGGC GTTGGATACG TGGTCGCGGT
CAGTTGGCCT TTGATGCGGC TGGCCAGCCT TTACGTATGT CTGGCACCAA TATGGATATT
ACTCAGCTTA AGCAGGCTGA AGAGAAAGTG GTAAAGGCTA AGGAACTAGC TGAGAAAGCC
AATAAAGCTA AGTCTGAATT TCTTTCCAGC ATGAGTCACG AATTGCGCAC TCCTCTCAAC
GCAATTTTAG GGTTTGCACA GCTGTTTGAG TTGGACAAAA ACCTTAACCC AGCGCAGCGA
GAAAATATTG GCGAAATAGA AAAGGCCGGC AAGCATTTGT TGGAGTTAAT TGGCGACGTG
TTGGATCTCG CCAAAATTGA AGCCGGTAAA ATGGATTTCG AGCTCGAGCA GTTAAACCCC
ATGCGATTAG TGGATGAATG TATTCCTCTT ATGCGGCCAC TGGCGGTTAA AAATCGCGTA
GAAATAAACG TCCATAATTT CGAGCTAGGC AATGCCAGCG TGCGTGCCGA CTCGGTACGT
TTAAAGCAAG TATTTATTAA CTTAATTTCG AATGCTATTA AATACAACCG CAAGGATGGC
CGAGTAGATA TCGTTTTTTC GGAGACCGAA GAAGGGCATT TGCGGGTCAG CGTACAAGAC
ACAGGCTTTG GTATTCCGCT AAAGCAACAA AAATATATGT TCCAGCCCTT CAATAGATTG
GGGGCCGAGC GGGGCGAAAT TGAAGGTAGC GGTGTGGGCT TGGTAATTAC ACGCCAGCTT
GTGGAGCAAA TGGGCGGCGA GCTCGGGTTT TCTAGCGATG AAGGCAAGGG CAGCAAGTTT
TGGGTGCAGC TGCCGCTATA CTCTGAGTCT GCAATTGGCG AATACCTAGG CGAAGCGGCC
GACGTGGCAA CGGCAGTACA AGCCGAGCAG GGTGAGCTAC CTACACTACG CGTTGCTGAG
CGCAAAAATA TTCTTTATAT CGAAGATAAC CCGCCCAACC AGCGCTTGAT GCGTCAGGTT
CTATCACGTT TTCCTGTTCT GCATTTAGAG GTAGTCGAGG AGGCCTTGCG CGGTATTTTT
ATGGCGCGTA CCCAGCATCC CGATTTAATT ATTCTGGATA TAAACATGCC GGGTATAAAT
GGGTACGAGG CACTAAATGT ATTGCGCAAA GATCCTGCCA CCCAAAAAAT TCCTGTTATT
GCGCTATCTG CCAATGCTAT GAGTCACGAT ATAGAAAAGG GTATGGCTTC TGGGTTTGAT
GTGTATTTAA CTAAGCCGCT AAACTTGGCG TTGCTAATAG ATGCTATAAA CGAGCTGATA
GCGGACGAAG CTTTCTAG
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| Protein sequence | MGWLSEVITS RKRQQRSSLG ARLRAMQEVR QRYERIFRGS HGYGFVDWDF KNRKMDWNGG
FWAYLGYGET DMEHISSPGQ FMEYVHTDDR AKVNNFVLGE LKGVGSGELV FRIRKKKGGY
IWAEVRVDNV RDSQGRVSFM SGVVFDVTKQ KQTEQALLIS EARHARIIQS SNDGIWEWSA
DHGGFQFSNR CWELLGYDQH DDELNQGVDK VQAWRDRMHP EDGELFDRTL EKHIKGEGPF
DVEYRIKGKN GNWRWIRGRG QLAFDAAGQP LRMSGTNMDI TQLKQAEEKV VKAKELAEKA
NKAKSEFLSS MSHELRTPLN AILGFAQLFE LDKNLNPAQR ENIGEIEKAG KHLLELIGDV
LDLAKIEAGK MDFELEQLNP MRLVDECIPL MRPLAVKNRV EINVHNFELG NASVRADSVR
LKQVFINLIS NAIKYNRKDG RVDIVFSETE EGHLRVSVQD TGFGIPLKQQ KYMFQPFNRL
GAERGEIEGS GVGLVITRQL VEQMGGELGF SSDEGKGSKF WVQLPLYSES AIGEYLGEAA
DVATAVQAEQ GELPTLRVAE RKNILYIEDN PPNQRLMRQV LSRFPVLHLE VVEEALRGIF
MARTQHPDLI ILDINMPGIN GYEALNVLRK DPATQKIPVI ALSANAMSHD IEKGMASGFD
VYLTKPLNLA LLIDAINELI ADEAF
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