| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1374 |
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| Symbol | |
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| ID | 3965854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1778043 |
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| End bp | 1779101 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920450 |
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| Product | SecD export membrane protein |
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| Protein accession | YP_526848 |
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| Protein GI | 90021021 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTAAAT TAAAACGCTA TATAGGCCAT ACAATTGCCG CCGCCGTGGC GACGGTGTTA
TTGGTTATTC TCTCGTTAGA TGCCATTTCA GACTTGGTTG ATCAGTTAAG TAATTTAAGT
GGCGATTACA CGTTTAGCGA AGCCATTATT TTTGTGCTGC TTTATATACC TTCAAGTGCC
TATGATTATT TACCGCTTTC TGCGCTGGTA GGGTGTTTGA TTGGTTTGGG GGTGTTGGCA
AGTTCTAGCG AGCTTGTGGT AATGCGTGCA GCGGGGGTGT CTGTTCTGCA GTTGGTTTGG
GCTGTTATGC GGCCTGTGTG CGTGTTTATT GGTGTAGGCG TTTTGGTTGG GGAGTACGTA
GCACCTTATT CCGATCAATA TGCTGATAGC CGTCGAGCCT TGGCAAAAGG GCATGATCGT
GCACTGCAGG CAGAGCGCGG TGTGTGGAAC CGCGAAGGCA ACGAGTATAT GCACTTTAAC
GCGGTATTGC CCAACGGTAA GTTGTACGGC ATTACCCGTT ATATATTTGA CGAGAAGGGG
CAGCTACTTG AGGCGAGCTT CGTCGATTCT GCTATTTACC AAGGTGAGTT CTGGTTTGAG
CAAGATGGAG AAGTCACTAG TTTCGAAGAT GGGCGCATAG AAAAGTTTGG CTTTGCTACG
CGCGAGTGGC GCACCGAGGT TTCGCCAGAT TTGCTTAATG TGTTGGTGTT AGACGCCGAC
GAACTGCCAA TGAAGCGATT ATACGATTAC TCAACCTACT TAGATAAACA GGGGTTGGAT
TCTAGTGAGT ACAAGCTGGC ATTTTGGCAT AAAGCATTCC AGCCTTTGGC GGTTGCCAGC
TTGGTGATGA TAGCAATCTC GTTTATTTTA GGGCCGCTGC GTCAAACAAC CATGGGGTTT
AGGGTGTTTA TTGGCGTCAT CGTGGGTTTA GTGTTTCAAA CTAGCCAAAA GATGCTTGGC
CCTGCATCCA TTATTATGGG GTTTTCCCCC ATGTTTGCGG TACTTATTCC TATAGTGGTG
TGCTTAGTGC TTGGTGTGTT TCTTATTCGA AGGGCTTAG
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| Protein sequence | MTKLKRYIGH TIAAAVATVL LVILSLDAIS DLVDQLSNLS GDYTFSEAII FVLLYIPSSA
YDYLPLSALV GCLIGLGVLA SSSELVVMRA AGVSVLQLVW AVMRPVCVFI GVGVLVGEYV
APYSDQYADS RRALAKGHDR ALQAERGVWN REGNEYMHFN AVLPNGKLYG ITRYIFDEKG
QLLEASFVDS AIYQGEFWFE QDGEVTSFED GRIEKFGFAT REWRTEVSPD LLNVLVLDAD
ELPMKRLYDY STYLDKQGLD SSEYKLAFWH KAFQPLAVAS LVMIAISFIL GPLRQTTMGF
RVFIGVIVGL VFQTSQKMLG PASIIMGFSP MFAVLIPIVV CLVLGVFLIR RA
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