| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1369 |
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| Symbol | valS |
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| ID | 3965849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1770446 |
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| End bp | 1773214 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920445 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_526843 |
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| Protein GI | 90021016 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAA CCTATCAACC CTCTGCCATA GAAACCGCCC TTTACCAAAA CTGGGAAGAA
AAAGGCTACT TTGCCCCCAG CGGAAAAGGT GACCCATACA GCATTATGAT TCCGCCACCC
AATGTGACGG GTAGCCTGCA TATGGGCCAC GGCTTCCAAG AAAGCATTAT GGATGCGCTA
ATTCGCTACC ACCGCATGAA GGGCAACAAC ACCCTTTGGC AGGTTGGTAC CGACCACGCA
GGTATCGCCA CCCAAATGGT TGTTGAGCGT CTACTCGATG CAGAAGGTAA ATCTCGCCAC
GATTTAGGCC GAGAAAAATT CATCGAGAAA GTATGGGAGT GGAAGGAAGA AAGCGGCGGC
AATATTACAC GCCAACTACG TCGCCTAGGT GCATCTCCAG ACTGGAGCCG CGAGCGCTTC
ACTATGGACG ATGGCTTTTA TAACGCGGTG CAAGAGGTTT TTGTTCGCCT CTATGAAGAC
GAGCTAATCT ACCGCGGTAA ACGCCTCGTA AACTGGGACC CAAAACTCCA CACAGCTATT
TCTGACCTAG AAGTGATTAG CGAAGAAGAA AAAGGCTTTA TGTGGCACTT CCGCTACCCG
CTAAGCGATG GCTCAGGCGA GTTAGTTGTG GCCACCACTC GCCCAGAAAC CATGTTGGGC
GATACCGCAG TTGCCGTAAA CCCAGAAGAC GAGCGCTACA AGCACCTAAT TGGCAAAACC
ATTAAGCTGC CGCTTACTGA TCGCGAAATT CCTATTATTG CGGATGATTA TGTCGACCAA
GAATTTGGCA CCGGCTGTGT AAAAATCACT CCAGCTCACG ACTTTAACGA TTACGAAATG
GGCCTGCGCC ACAACCTACC CATGATCAAC TTGTTTGATG ACGACGCGCA ACTAAACAAC
AATGCCCCGG AAAAATATCG CGGCATGGAT CGCTTCGACG CACGCAAACA AATCGTCGCC
GACCTAGATG CGTTGGGCTT GCTAGAAAAA ATTGTAGATC ACACCCTAAA AGTACCTCGT
GGAGACCGCA GCGGCGTAGT AATCGAGCCC TACTTGACTA ACCAGTGGTA CGTAAAAACC
CAGCCTTTAG CAGACGAAGC CATTAAGGCC GTTGAAGAAG GCGATATCAA CTTTGTACCT
AAACAATACG AGAACATGTA CTTCTCTTGG ATGCGCGACA TTCAGGACTG GTGCATTTCA
CGCCAACTTT GGTGGGGCCA CCGCATACCA GCTTGGTACG ACGCCGATGG CAAAGTGTAT
GTGGGCCGCA GTGAAGATGA CGTACGTAAA AAACACAACA TCGCAGCCGA CGTAGAATTA
AAACAAGATG AAGACGTGCT CGATACATGG TTCTCATCAG GCCTGTGGAC ATTCGGCACC
TTAGGCTGGC CAGAAGACAC CGATTTTCTC AAAACCTTCC ACCCATCCTC TGTGTTGGTT
ACAGGTTTCG ATATTATCTT CTTCTGGGTT GCCCGCATGA TTATGCTCAC CCTTTACTTC
AAAAAAGAAG TGCCCTTTAA AACGGTGTAC GTGCACGGGC TAGTGCGCGA TAGCCAAGGG
CAAAAGATGA GTAAATCTAA AGGTAACGTA CTCGACCCCA TCGACCTTAT CGACGGCATT
GAGCTAGAAA CATTAGTGGC CAAGCGCACC GCTGGCATGA TGGTGCCTAA GCTCCGAGAA
AAAATCGAAA AACAAACCCG TAAAGAATTC CCTGACGGTA TTGCAGGCTA CGGTACCGAC
GCATTGCGTT ACACCTACTA CTCGCTTGCA TCCACTGGGC GCGATATTAA TTTTGACGTG
GGCCGTATTG AAGGCTTCCG CAACTTCTGC AACAAACTGT GGAATGCCAG CAACTACGTA
CTAATGAATA CCGAAGGGCA AGATTGCGGC CAAGATGGCA GCGACGATTA CACCCTTTCA
CTAGCAGACC GCTGGATTGT ATCGCGCTTA CAAGAAGCCG AAAAGGCTGT GCGCGAAGGC
ATGGAAACCT ACCGTTTAGA CTTGGCCAGC CAAGCCCTAT ACGATTTTAT TTGGAAAGAT
TACTGCGACT GGTACTTAGA GCTTACCAAG CCTGTATTAT GGGATGACAA TGCCAGCACC
CAACTTAAAA AAGGCACACG CCGCACACTT ATTCGCGTAC TGGAAACCAC TCTGCGCCTA
GCGCACCCAC TCATGCCATT TATTACCGAA GAAATTTGGC AGCGCGTTAA ACCGCTTGCG
GGTGTGGAAG GCGAAACAAT TATGCTGGCG CAGTACCCAA CCCCAGATGA TGCCAAAATT
GATAATCAAG CCGTAGCCGA TATTGAGTGG CTAAAAGGCG TGATTTTAGG CGTGCGAACT
ATTCGCGGCG AAATGAATAT CTCCCCAGCC AAACAGCTGG AAGTATTTAT TACCAACGCG
GATGCAAACG ATCAGCGATG CTTAACCGAA AACAACCAGT TCTTAACCAA GCTCGCGTCA
CTCGAATCCG CCGTGTACGT GGCAGACGCA AGCACCCTAC CGCCAACAGC CACCTCGTTG
GTTGGCAGCC TAGAGGTGCA CGTACCCATG GCAGGCAATA TCGATAAAGA TGCAGAGCTA
GCACGCTTGG ATAAAGAAAT TCAAAAAATT GAAAAAGACA TTACTCTGCT AAACGGCAAG
CTCAGCAACC CCAAGTTTGT AGATAAAGCA CCAGCAGACG TTGTTGCCAA AGAAAAAGAT
CGTCTAGAAG CAGCCAAAAC CTCTATTGCC AAGCTCGAAG AGCAAAAGCA AAAGATCGCT
TCGTTTTAA
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| Protein sequence | MDKTYQPSAI ETALYQNWEE KGYFAPSGKG DPYSIMIPPP NVTGSLHMGH GFQESIMDAL
IRYHRMKGNN TLWQVGTDHA GIATQMVVER LLDAEGKSRH DLGREKFIEK VWEWKEESGG
NITRQLRRLG ASPDWSRERF TMDDGFYNAV QEVFVRLYED ELIYRGKRLV NWDPKLHTAI
SDLEVISEEE KGFMWHFRYP LSDGSGELVV ATTRPETMLG DTAVAVNPED ERYKHLIGKT
IKLPLTDREI PIIADDYVDQ EFGTGCVKIT PAHDFNDYEM GLRHNLPMIN LFDDDAQLNN
NAPEKYRGMD RFDARKQIVA DLDALGLLEK IVDHTLKVPR GDRSGVVIEP YLTNQWYVKT
QPLADEAIKA VEEGDINFVP KQYENMYFSW MRDIQDWCIS RQLWWGHRIP AWYDADGKVY
VGRSEDDVRK KHNIAADVEL KQDEDVLDTW FSSGLWTFGT LGWPEDTDFL KTFHPSSVLV
TGFDIIFFWV ARMIMLTLYF KKEVPFKTVY VHGLVRDSQG QKMSKSKGNV LDPIDLIDGI
ELETLVAKRT AGMMVPKLRE KIEKQTRKEF PDGIAGYGTD ALRYTYYSLA STGRDINFDV
GRIEGFRNFC NKLWNASNYV LMNTEGQDCG QDGSDDYTLS LADRWIVSRL QEAEKAVREG
METYRLDLAS QALYDFIWKD YCDWYLELTK PVLWDDNAST QLKKGTRRTL IRVLETTLRL
AHPLMPFITE EIWQRVKPLA GVEGETIMLA QYPTPDDAKI DNQAVADIEW LKGVILGVRT
IRGEMNISPA KQLEVFITNA DANDQRCLTE NNQFLTKLAS LESAVYVADA STLPPTATSL
VGSLEVHVPM AGNIDKDAEL ARLDKEIQKI EKDITLLNGK LSNPKFVDKA PADVVAKEKD
RLEAAKTSIA KLEEQKQKIA SF
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