| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1368 |
|---|
| Symbol | |
|---|
| ID | 3965848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 1769823 |
|---|
| End bp | 1770260 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637920444 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_526842 |
|---|
| Protein GI | 90021015 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAGA AGCCACTTTT AATAAGTTTC GTGTTAATTA CAACTGGATG CGGAGCCTCT
ATGCAAGCCA AAGACTGTGC CACAACAGAT TGGAACCAGA AAGGCTACGA GGACGCAATG
CAAGGTAAAA CCAACGAGAC TTTTGAAGAG TATAAAAATA TCTGCAGCGC AAACCCGCCG
AATGCAGCCG AATATGTAAC AGGCTACAAG CGAGCAACAA CCGAGTACTG TACAGAAAGT
AACGGATACG ATCGAGGTAT TAAAGGAGGT AAATACCACT TAAGCTGCGC GCAAGACAGT
GAGTATTACC ACGCCTACGT CAAAGCTTTG AAAAAACATT CTGAAGAACG AGAACGAAAA
CAGCTAGAGC GCCTCACAAG GCACGGCGGG GATGTGACAG ATTCTCGCGC AGCTCCTGGT
GGTAGCCCAG GCATGTAG
|
|---|
| Protein sequence | MIKKPLLISF VLITTGCGAS MQAKDCATTD WNQKGYEDAM QGKTNETFEE YKNICSANPP
NAAEYVTGYK RATTEYCTES NGYDRGIKGG KYHLSCAQDS EYYHAYVKAL KKHSEERERK
QLERLTRHGG DVTDSRAAPG GSPGM
|
|---|
| |