| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1318 |
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| Symbol | |
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| ID | 3966089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1710240 |
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| End bp | 1712675 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920394 |
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| Product | cellobiose phosphorylase |
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| Protein accession | YP_526792 |
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| Protein GI | 90020965 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3459] Cellobiose phosphorylase |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0462617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTG GGCACTTTGA CGACAAAGCA CGCGAGTATG TAATTACCGA CCCGAAAACT
CCCTACCCGT GGATAAACTA CTTAGGCAAC GAAGACTTCT TCAGCCTAGT ATCTAACACT
GGGGGTGGCT ACAGTTTTTA CAAAGATGCA AAGTTCCGTC GTTTAACACG CTATAGATAC
AACAACGTAC CCGTAGACAA CGGCGGTAAA TATTTTTACA TCAATGATAG TGGCGATGTA
TGGAGCCCCG GTTGGAAGCC GGTAAAAGCA GAGCTAGACG CATACAGCTG CGCTCACGGC
CTTAGCTACA CCCGCATTAC CGGCGAAAGA AACGGCATTC AAGCGGAAGT ACTTAGCTTT
ATCCCTCTCG GCACTTGGGC CGAAATTCAA AAAGTTAGCC TTAAGAATAC CTCTGGCGCT
ACCAAAAAAT TTAAACTGTT TTCTTTCGCC GAATGGTGCC TATGGAACGC AGAAGATGAC
ATGACCAACT TCCAACGCAA CTTCTCCACC GGTGAAGTAG AGGTGGAAGA CTCTGTTATT
TATCACAAGA CAGAATTTAA AGAGCGCCGC AATCATTACG CATTCTACTC TGTAAACGCA
CCAATTCAGG GCTTCGACAC CGACAGAGAC AAATGGAAAG GCTTGTACAA CGATTTTGAT
AAACCCGATG CCGTTTTTGA AGGCGAGCCT CGCAACTCCG AAGCGCACGG CTGGTCGCCA
ATTGCATCTC ACTATCTAGA AGTGGAGCTC GCACCAGGCG AAAGCAAAGA CTTAATTTTT
GTGCTTGGCT ATATAGAAGT TGCCCCAGAA AACAAATGGG AATCAAAGGG CGTTATCAAC
AAGTCTCCAG CCAAAGAACT TATTGCGCGT TTCGATAGCG TAGAAAAAGT AGATGCCGAG
TTAACCAAGC TAGCCGATTA TTGGGCAAAT TTGCTTTCTA CTTACAGCGT AGAAAGTGGC
GACGAAAAGC TAGACCGCAT GGTAAATATT TGGAACCAAT ACCAGTGTAT GGTGACATTT
AATATGAGTC GCTCTGCGTC TTTCTTCGAA TCTGGCATTG GCCGTGGTAT GGGCTTCCGC
GATTCCAATC AGGATTTGAT AGGCTTTGTA CACCAAGTAC CCGAGCGCGC CCGCGAACGC
ATAATTGATA TTGCTTCTAC TCAGTTTGAA GACGGTTCGG CCTACCACCA GTATCAGCCT
TTAACCAAAC GCGGCAACAA CGCAATTGGC GGCAACTTTA ACGATGACCC TCTTTGGCTA
ATCCTTTCTA CCACCGATTA CATAAAAGAG ACTGGCGATT TCTCTATTTT AGAAGAGCAA
GTGCCTTACG ATAATGATGC GAGCAAAGCC ACAAGTCATT TTGAACATTT AAAGCGCTCG
TTTTATCACA CGGTTAATAA TTTAGGCCCA CATGGCTTGC CACTTATTGG TCGCGCCGAC
TGGAACGACT GCCTAAACCT AAACTGCTTT AGTGAAGACC CTAACGAATC ATTCCAAACC
ACGGGCAACA AAACCGGCAG AACGGCTGAG TCGTTAATGA TTGCAGGTTT ATTTGTTTTA
TACGGCAACG AGTTTGTAAA ACTGTGCCGT GAAATAGGCC AAGACGGAGA AGCGGCAGAA
GCCCAAGCCC ATATTGACCA AATGGTAGAA GCTGTGAAAA AGCACGGCTG GGATGGCGAG
TGGTTTTTGC GTGCTTACGA CTACTACGGT AAAAAAGTAG GCAGTAAAGA AAACGAAGAA
GGCAAAATAT TTATCGAATC GCAAGGTTTC TGCGGCATGG CAGGAATCGG CCTAGAAGAC
GGCCTTGTCG AAAAATCGAT GGATTCTGTT AAAGAATGGT TAGATTGCGA TTACGGTATT
GTGTTGCAGC AACCGGCGTT TACCAAGTAC TACATAGAGT ATGGTGAAAT CTCCACCTAC
CCTGCTGGCT ACAAAGAGAA CGCAGGTATC TTCTGCCACA ACAACCCGTG GATTATGATC
ACCGAAACTT TGCTTGGCCG CGGTGACAAA GCCTTTGAAT ACTACCGCAA AATTGCACCT
GCATACCTAG AGGAAATTAG CGATCTTCAC AAAGTAGAGC CTTACGCCTA CTGCCAGATG
ATTGCAGGTA AAGATGCCTA CTTACCTGGC GAGGGTAAAA ACTCATGGCT AACAGGGACC
GCTTCGTGGA ACTTCGCTGC AATTACTCAG TACATTTTAG GCGTAAAACC AGACTATAGC
GGTTTAGCAA TTAACCCTTG CATACCGTCT AGCTGGGATG GCTTTAAAGT TACCCGTAAG
TATCGCGGCG CAACCTATAA CATCATCGTA ACCAACCCAA CCCATGTAAG CAAAGGCGTA
AAATCGCTCA CCCTAAATGG CAACGCTATT GATGGCTACA TAGTGCCACC GCAACAAGCT
GGCACCGTAT GTAACGTAGA AGTTACATTG GGCTAA
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| Protein sequence | MKFGHFDDKA REYVITDPKT PYPWINYLGN EDFFSLVSNT GGGYSFYKDA KFRRLTRYRY
NNVPVDNGGK YFYINDSGDV WSPGWKPVKA ELDAYSCAHG LSYTRITGER NGIQAEVLSF
IPLGTWAEIQ KVSLKNTSGA TKKFKLFSFA EWCLWNAEDD MTNFQRNFST GEVEVEDSVI
YHKTEFKERR NHYAFYSVNA PIQGFDTDRD KWKGLYNDFD KPDAVFEGEP RNSEAHGWSP
IASHYLEVEL APGESKDLIF VLGYIEVAPE NKWESKGVIN KSPAKELIAR FDSVEKVDAE
LTKLADYWAN LLSTYSVESG DEKLDRMVNI WNQYQCMVTF NMSRSASFFE SGIGRGMGFR
DSNQDLIGFV HQVPERARER IIDIASTQFE DGSAYHQYQP LTKRGNNAIG GNFNDDPLWL
ILSTTDYIKE TGDFSILEEQ VPYDNDASKA TSHFEHLKRS FYHTVNNLGP HGLPLIGRAD
WNDCLNLNCF SEDPNESFQT TGNKTGRTAE SLMIAGLFVL YGNEFVKLCR EIGQDGEAAE
AQAHIDQMVE AVKKHGWDGE WFLRAYDYYG KKVGSKENEE GKIFIESQGF CGMAGIGLED
GLVEKSMDSV KEWLDCDYGI VLQQPAFTKY YIEYGEISTY PAGYKENAGI FCHNNPWIMI
TETLLGRGDK AFEYYRKIAP AYLEEISDLH KVEPYAYCQM IAGKDAYLPG EGKNSWLTGT
ASWNFAAITQ YILGVKPDYS GLAINPCIPS SWDGFKVTRK YRGATYNIIV TNPTHVSKGV
KSLTLNGNAI DGYIVPPQQA GTVCNVEVTL G
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