Gene Sde_1289 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1289 
Symbol 
ID3965271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1653197 
End bp1653643 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content45% 
IMG OID637920363 
ProductrecX protein 
Protein accessionYP_526763 
Protein GI90020936 
COG category[R] General function prediction only 
COG ID[COG2137] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTACC CCTCTGTTAA AAATGCTGCG CTAGGCCTAT TGGCCAGGCG CGAGCACAGC 
GAGTATGAGT TACGCACTAA ACTCAAGCAA AAATTCCCCG TTGATGAAGA GCTTCTAAAT
ACACTTGTAG GCGAATTGGT TGGCTTAAAT TACCTAAGTG ATGAGCGCTT TGCTGAAATG
TATGTGCGTG TTCGCCAGTC AAAAGGCTTT GGTCGCGAGC GAGTAATGCG TGATCTACAA
GAAAAGGGCA TTTCTAGCGA ACTTGCGTCT AACTGTATTG AGCAAATCGA CACTTGGTTA
GAAACTGCCA CACACGTATG GCAAAAGAAA TTTGGTGTGC CGGCAGAAGA CTACAAAAGC
AGAATGAAAC AAATGCAGTT TTTGCGCTAT AGAGGCTTTA CACACCAAGA AGCAGAGCGG
GTAGTGGCCG GCTGTACATT TGAATAG
 
Protein sequence
MDYPSVKNAA LGLLARREHS EYELRTKLKQ KFPVDEELLN TLVGELVGLN YLSDERFAEM 
YVRVRQSKGF GRERVMRDLQ EKGISSELAS NCIEQIDTWL ETATHVWQKK FGVPAEDYKS
RMKQMQFLRY RGFTHQEAER VVAGCTFE