| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1271 |
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| Symbol | |
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| ID | 3965253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1628441 |
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| End bp | 1629913 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920345 |
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| Product | D-mannonate oxidoreductase |
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| Protein accession | YP_526745 |
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| Protein GI | 90020918 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.291275 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACC TACACCTAAA CTACGAATCT CTTTCGAACG TGCTTGACCC TGTAAAAAAG
CCACAGTACA CGCCAAGCGA ACACCGCAGC GGCATAGTCC ATATTGGCAT TGGTGCCTTT
CACAAAGCGC ACCAAGCCGT GTTTACCGAC GATGTATTAA ACATGCACGG CGGCGACTGG
CGCATTACTG CAGTAAGCTT ACGCAGGCCC GATGCACGCG ATCAACTTGA AAAACAAAAC
AGTTTATATA CCGTCGTAGA AAAATCAGAC GGTGAAATTT CACCGCGAAT TATTGGCGCG
GTGGAAAAAG TTTTGGTTTG CCCCGAAGAC CCACAACAAG TCATCAATAC AATTGCCAGC
ACCGACATTA AAATTGTATC GCTAACCATT ACTGAAAAAG GCTATTGCCA AAAAAATGGA
ACCTTAGATA CATCCAATGT AGATATCGCT CACGATCTAA ATAACTTAAG CGCCCCAAAA
AGTATGCCTG GGTTAATTGT CGCAGCTTGC GCGGCAAGAA AGCAAAACAA CGCTAATGGC
TTTACCGTAT TAAGTTGCGA TAACTTGCCC CACAACGGCA AAATAACGCA AAACGTTGTA
ATGCGTTTTG CAGAAAAGGT AGACGCCGAA TTAGCCAGCT GGATAGCAAC ACACATTAGC
TTCTGCAGCA CTATGGTGGA TAGAATTGTA CCCGCAACCA CCAGCGCCGA CTTAGACGAA
GTAAAAAATC TTATAGGTCT AGCAGACGAT GCCGCCGTTA TTTGCGAACC ATTTAGGCAG
TGGGTAATAG AAGACAATTT TGTGGCGGGT AGACCGCAGT GGGAAGACGC CGGCGCACTA
CTTGTTGCCG ATGTAACCCC CTACGAAGAC ATGAAATTAC GCTTACTAAA TGGCAGCCAT
TCAGCGCTGG CTTATTTAGG TTTTTTATCT GGCTTCGACT TCATTCATCA AGCCATCGCC
AACCCTCGCT TACTGGCGTT AACCAAAAAA CTAATGGATG AAGACGTAAC CCCTACCCTA
AATGTACCTT CGGGGTTCGA TTTAGACGCG TATAAAGCAA TTATTCGCAC ACGCTTCGCC
AATAGCCGAG TACCCTACAA AACAACGCAA GTAGCAAATG ACGGCTCGCA AAAACTGCCA
CAACGTATTC TTGCAGTTGC GGATCACTTA ATATCAGGTG GCAAACAGCC CGCTGTAATT
CCAGCCATTA TCGCCGCATG GTTTCAGTTT TTAGAGGGCC AAGATACTCA TGGCGAGCAA
CATACGGTTA ACGACCCGCT AGCAAACACA CTTTGCCCTC TTGCGCTTAA GCACAAGGCT
AACGACACCA AACAGGTACA AGAGCTAGTT GCAGCAAGTC AAATATTCCC AGAAGGCTTA
ATAGCGAATA CTGAGTTTAT TAATAGCATT GAACATTATC TTGCTAAATT TCATGCAAAA
GGGGTGTTGA CCACACTCGC TGAATTAAAC TAA
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| Protein sequence | MSNLHLNYES LSNVLDPVKK PQYTPSEHRS GIVHIGIGAF HKAHQAVFTD DVLNMHGGDW
RITAVSLRRP DARDQLEKQN SLYTVVEKSD GEISPRIIGA VEKVLVCPED PQQVINTIAS
TDIKIVSLTI TEKGYCQKNG TLDTSNVDIA HDLNNLSAPK SMPGLIVAAC AARKQNNANG
FTVLSCDNLP HNGKITQNVV MRFAEKVDAE LASWIATHIS FCSTMVDRIV PATTSADLDE
VKNLIGLADD AAVICEPFRQ WVIEDNFVAG RPQWEDAGAL LVADVTPYED MKLRLLNGSH
SALAYLGFLS GFDFIHQAIA NPRLLALTKK LMDEDVTPTL NVPSGFDLDA YKAIIRTRFA
NSRVPYKTTQ VANDGSQKLP QRILAVADHL ISGGKQPAVI PAIIAAWFQF LEGQDTHGEQ
HTVNDPLANT LCPLALKHKA NDTKQVQELV AASQIFPEGL IANTEFINSI EHYLAKFHAK
GVLTTLAELN
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