Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1238 |
Symbol | |
ID | 3968199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1588348 |
End bp | 1588917 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637920312 |
Product | 4-methyl-5(beta-hydroxyethyl)-thiazol monophosphate biosynthesis protein-like |
Protein accession | YP_526712 |
Protein GI | 90020885 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | [TIGR01383] DJ-1 family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAG TTCTTGTTCT AGTAGCTGAT GGTACAGAAG AAATAGAAGC CGTAACGGTG GTGGATGTAT TGCGCCGTGT AGGGGCGAAA GTAACTGTTG CGTCGGTAAT GCCGCAAATG GCGACTATTG CAGCCTCCCG TGGGGTGAAA ATAGTGGCCG ATACAATTCT AAGGCCGCAT CTATTTGATA CCCAATGGGA TGCCCTTGTG TTGCCCGGTG GTATGCCTGG GGCGGAATAC CTTGGCTTAT CTGCAGAGGT AGTAACACTT ATAAAGAACA CAAAAGCGGC GGGAAATATT ATTGCGGCTA TTTGTGCGGC TCCGGCAGTA GTGTTGGGTC GCAACGGTTT GTTAGAGGGG GCCGAAGCAA CGTGTCACCC CAGCTTTCAG GCAGAATTGG CGCATCACAC CACGGTATCT AGCGCGCGCG TGGTAGATGC AGGCTGGCTT ATTACGAGCC AAGGGCCCGG CACCGCAATT GAGTTCGCCC TAAAGCTGGT AGCGAGGCTT TACTCGCCAA TCGAAGCTGC CGCGCTGGCA GAGGCAATGG TTGTAGATAT TCCTATTTAG
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Protein sequence | MKQVLVLVAD GTEEIEAVTV VDVLRRVGAK VTVASVMPQM ATIAASRGVK IVADTILRPH LFDTQWDALV LPGGMPGAEY LGLSAEVVTL IKNTKAAGNI IAAICAAPAV VLGRNGLLEG AEATCHPSFQ AELAHHTTVS SARVVDAGWL ITSQGPGTAI EFALKLVARL YSPIEAAALA EAMVVDIPI
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