Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1237 |
Symbol | |
ID | 3968198 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1586968 |
End bp | 1588257 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637920311 |
Product | GntR family transcriptional regulator |
Protein accession | YP_526711 |
Protein GI | 90020884 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain [TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAAA TAGAACGCGA AATTTCTGCC CAAATAACTG CGCTTTCGCC GCAAGCGTGC GTGTGGGTGG CGTTCAGTGG TGGACTCGAT TCTACCGTGC TGCTGCATGC CCTATCTGTT TTGGGGGTTA AATGCCATGC GGTACATGTT AATCATGGCT TATCTATTAA TGCAGATAAT TGGCAGCGCC AGTGCAGTGT GTTTGCATCG CAGCGCGAAA TTGCTTTCAC GGCGGTTAAA GTGATTGTAT CGGCTGAAGG TCGCGGTATA GAAGAGGCGG CGCGTGTAGC GCGCTATAAC GCGATAGAGA ATTTACTCGC ACCCAGCGAT GTATTGCTTA CGGGGCATCA CCGCGACGAT CAAATAGAAA CGTTTTTTTT GCGTTTAATG CGCGGGGCTG GTTTGCGCGG CTTGGGGGCA ATGCGGCGCA CACGCTCGCT CAGTCAGGCA ATACTTGTAC GGCCACTGCT AAATATTAGT CGGCAATCAT TGCACGAATA TGCCCTGCAA CAGGGGTTAA CTTGGATAGA AGACGAGAGT AACTTAGATA CGCATTACGA CAGAAACCTA TTGCGTCAAA CCTTTGTACC GCAACTTAAG GCGCGTTGGC CGCAAGTTGA AAAAAACGTA GAAACTACTG TGCAACACTT ACAGGCAGCA GAAGATTTAT TGCAAGAATA TGCCGCCGCT GATCTAGCAC TCTGCGAAAG CAGGCAAGAG CGACTAGGCT GCAGTATTGC GTTAAACCCG ATGCGGGCGT TCTCGACAGA GCGTACCAGC CATATTTTAC GCAGCTGGCT TGCAAGCTTA GGTTACAAAT TACCAGACAC TGCGCGCATG GTTGAGCTGC ATAAAATAAT CGCTGCAAAA GACGATGCAG CACCGCTATT GAATATTGGT GATTACAGCT TGTGTCGTTT TCAGCAACGG CTGTACTGTT TGCCGCGCAC TGCAATCGAA ACGGATTGCG CGCCACATAC TTGGAACCCT ATTGAGCCAC TGCATGCCGC AGATGGTAGT GAGCTGCGGT TTACTGCTGC AAGCGACAAC ATGCCGGTTT TTGAGGTGGC TTACCGTCAA GGGGGGGAGC GCTGCAAGCC CGTGGGGCGA GGGCATTCGC AAACCCTCAA AAAACTATTG CAGGAATACG GTCTGGAACC CTGGCTTAGG GCTAAGGTGC CGCTTATTTA CTATCAAGGT AACCTTATTG CCGTGGGGGA CTTGTGGTTG TGCGAAACCG AAACAGGTAA GGGGGTAGAA GGGCATTTTG AATGGGGCTA TTTTGAATGA
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Protein sequence | MNEIEREISA QITALSPQAC VWVAFSGGLD STVLLHALSV LGVKCHAVHV NHGLSINADN WQRQCSVFAS QREIAFTAVK VIVSAEGRGI EEAARVARYN AIENLLAPSD VLLTGHHRDD QIETFFLRLM RGAGLRGLGA MRRTRSLSQA ILVRPLLNIS RQSLHEYALQ QGLTWIEDES NLDTHYDRNL LRQTFVPQLK ARWPQVEKNV ETTVQHLQAA EDLLQEYAAA DLALCESRQE RLGCSIALNP MRAFSTERTS HILRSWLASL GYKLPDTARM VELHKIIAAK DDAAPLLNIG DYSLCRFQQR LYCLPRTAIE TDCAPHTWNP IEPLHAADGS ELRFTAASDN MPVFEVAYRQ GGERCKPVGR GHSQTLKKLL QEYGLEPWLR AKVPLIYYQG NLIAVGDLWL CETETGKGVE GHFEWGYFE
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