| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1231 |
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| Symbol | |
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| ID | 3968016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1578452 |
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| End bp | 1580017 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920305 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_526705 |
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| Protein GI | 90020878 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAATT TAATATATAG AACGCCAAAC AACGTTAAAA ACGATTTACT TTCTGGTCTT
ACGGTAGCCC TTGCCTTAGT ACCCGAAGCT GTAGCCTTTG CATTTGTGGC GGGGCTAGAA
CCTATGGTGG GTTTGTATGC TGCCTTTATG ATGGGTTTGA TTACATCCTT GATTGGTGGC
CGCCCAGGTA TGATTTCTGG TGCAACCGGC GCAACAGCGG TTGTAATGGT TGCCCTTGTT
ATGGAGTACG GCGCCCAGTA TTTATTTGCG GCCGTTTTGC TTGCAGGTGT TATTCAAATT
GGTGCAGGTA TATTGAAGCT AGGTAAATAT ATTCGCATGG TGCCTCACCC GGTAATGCTG
GGGTTTGTAA ACGGCTTGGC GATTGTTATT TTTCTTGCTC AGCTCGGCCA ATTTACAGTT
AAAAATGAAG TGGGCGAAAG CGTGTGGATG GAAGGCACCA TGCTTTACAC CATGATAGGC
CTTATAGCTT TAACTATGGC GATTATTCAC TTTTTACCCA AGCTCACCAC AGCAGTACCC
TCTTCGTTAG TAGCCATTGC TGTAGTTACT CTACTTGTAC ATTTTACTGG CTTGGAAGCG
CGCACGGTTA TCGACTTTGT TCGCGATATG CTACCAGCAG AAGAAGCGGC AACAGCGACA
TTAAAAGGTG AACTACCCAG CTTCGCTATT CCAGCCATTC CTTTCACTTG GGAAACGCTG
CGCATTATTT TCCCTGTTGG ACTTATTATT GCTGCAATTG GCTTAATAGA ATCTTTACTT
ACCCTTACAC TTATTGACGA AATAACCGGC ACGCGCGGCC ACGGCAACCG TGAGTGTGTA
GGCCAAGGCG TTGCTAACAC AGTAAACGGC TTTTTTGGCG GTATGGGCGG TTGCGCCATG
ATAGGCCAAA GCATGATTAA CATTAACTCT GGCGGTCGCG GGCGCTTATC AGGCGTAACG
GCAGCCATTG TATTGCTCGG CTTTATTTTG TTCGGTGCAG CCCTTATAGA AATTATTCCA
CTGGCGGCAC TTGTAGGCGT AATGTTTATG GTTGTGCTGG GTACGTTTGA GTGGTCATCA
CTGCGTATTA TTCGCAAAAT CCCACTCTCG GATGCCATTA TTATTATTTT GGTTTCCGGC
ATTACTGTTA TTGCTGACTT AGCTATTGCC GTAATTGTAG GTGTGATTGT TTCTGCACTC
GTTTTCGCTT GGAAACACGC ACAACATATT CATGCAGAAG TTACCACCGA CGAAAACGGC
ACAAAAATAT ATTCTTTACG CGGCCCTGTC TTTTTTGGTT CTGTTGCTAA CTTCAAAGAA
TTGTTTACAC CAGAAACAGA CCCAGACAAC GTAATTATTG ATTTTGTACG CAGTCGCGTT
AGTGATCACT CGGGTATTGA AGCGCTAGAC GGCCTTGCAG AAAAATACAC TGCTCTTGGC
AAAAATCTAA GTATTCGCCA CCTAAGTAAA GAGTGTATTC AGCTGCTAGA AAAAGCGGGC
AACCTGTGCG AGGTAAACGT ACTGGAAGAC CCAGACTACC ACGTAGCAAC CGATAAACTC
GGCTAA
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| Protein sequence | MFNLIYRTPN NVKNDLLSGL TVALALVPEA VAFAFVAGLE PMVGLYAAFM MGLITSLIGG
RPGMISGATG ATAVVMVALV MEYGAQYLFA AVLLAGVIQI GAGILKLGKY IRMVPHPVML
GFVNGLAIVI FLAQLGQFTV KNEVGESVWM EGTMLYTMIG LIALTMAIIH FLPKLTTAVP
SSLVAIAVVT LLVHFTGLEA RTVIDFVRDM LPAEEAATAT LKGELPSFAI PAIPFTWETL
RIIFPVGLII AAIGLIESLL TLTLIDEITG TRGHGNRECV GQGVANTVNG FFGGMGGCAM
IGQSMININS GGRGRLSGVT AAIVLLGFIL FGAALIEIIP LAALVGVMFM VVLGTFEWSS
LRIIRKIPLS DAIIIILVSG ITVIADLAIA VIVGVIVSAL VFAWKHAQHI HAEVTTDENG
TKIYSLRGPV FFGSVANFKE LFTPETDPDN VIIDFVRSRV SDHSGIEALD GLAEKYTALG
KNLSIRHLSK ECIQLLEKAG NLCEVNVLED PDYHVATDKL G
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