| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1217 |
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| Symbol | |
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| ID | 3968002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1564187 |
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| End bp | 1565695 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920291 |
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| Product | protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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| Protein accession | YP_526691 |
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| Protein GI | 90020864 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00362482 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATT CACAAACACC AATTAATACC GATGACGAAA ATAAATTAGT AGCAGAGCGC
CGCGCCAAGT TAGCGGCAAT TCGCGAGCAG GGCAATGCGT TCCCGAATGA GTTTCGTCCG
CAAAATCAAG CGCAAGATTT ACAAGAAAGC CATGGCGATA AAACTAAAGA GGCTTTAGAA
GAAGCGGCTG AAGTGGTGAG TGTGGCCGGT CGTATTATTC GCAACCGCGG TGCGTTTATG
GAGCTGCAAG ATGGCAGCGG CCGCATCCAG CTATACGTAA CCAAAGAAGC GCGTCCGTTC
GCGAAGTCGT TGGACTTGGG CGACATTGTT GGTGCAAAAG GTGTGCTGCA TAAGTCCGGT
AAAGGCGACT TGTATGTAAG CTTAGATGAA TACCAGTTGC TTACTAAGGC ATTGCGCCCG
CTACCGGATA AGTTCCATGG ATTGGCTGAC CAAGAAATGC GTTATCGTCA GCGCTATGTG
GATTTAATTG CAAACCCAGA AGTGCGAAAA ACCTTTGTTA CTCGATCGCG CGTTGTGCAA
TTTATTCGAA ACTATTTAAA CGAAAAAGCG TTTTTAGAAG TAGAAACGCC CATGCTGCAA
ACTATTCCTG GTGGTGCGTC TGCACGCCCA TTTATTACGC ACCACAATGC GCTAGATATG
GATATGTATT TGCGCATCGC ACCCGAGCTT TACCTTAAGC GTTTGGTGGT AGGTGGTTTC
GAAAGGGTAT ACGAGATTAA CCGCAACTTC CGCAACGAAG GGTTATCTAC TCGTCACAAT
CCAGAATTTA CTATGTTGGA GTTTTATCAG GCTTACGCGG ATTACAATGA CCTGATGGAC
TTAACCGAAG ACATGCTGCG CAACCTAGCT CAAACTGTGT TAGGCGATAC GAAAGTTGTG
AATACGTTGC CAAGCAAAGG CGACGACGAG CCAGAAACCG TTACCTACGA CTTTGCTCAG
CCGTTTACAC GTCTATCTGT GTTTAACTCT ATTTTGCAGT ACAACCCAGA ATTAAAAGCA
GAGAATATCG ATACCCTTGA GGCCGCGCGT GAAGTAGCTA AAAACCTCGG TGTTCAGCTA
AAAGACAGCT ACGGTTTAGG CAAGGTTCAA ATCGAGATAT TCGAGAAAAC CGTTGAGCAC
AGATTAATTC AGCCAACTTT TATTACAGAG TACCCAACCG AGGTATCTCC ACTTGCTCGT
CGAAGCGACA GTAACCCTTT TGTTACCGAT CGTTTTGAGT TCTTTGTGGG TGGTCGTGAA
ATTGCTAATG GTTTTTCGGA GCTTAACGAT GCTGAAGATC AGGCGCAGCG CTTTAAAGAG
CAGGTTGCCG AAAAAGACGC CGGCGATGAC GAGGCTATGC ATTACGATGC CGACTATGTG
CGAGCACTTG AATACGGTTT GCCGCCAACT GCGGGTGAAG GTATAGGTAT CGATCGTTTG
GTTATGTTAC TAACCGATTC TCCATCTATT CGCGACGTAT TGTTGTTCCC GCATATGCGT
CCTGAGTAA
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| Protein sequence | MSDSQTPINT DDENKLVAER RAKLAAIREQ GNAFPNEFRP QNQAQDLQES HGDKTKEALE
EAAEVVSVAG RIIRNRGAFM ELQDGSGRIQ LYVTKEARPF AKSLDLGDIV GAKGVLHKSG
KGDLYVSLDE YQLLTKALRP LPDKFHGLAD QEMRYRQRYV DLIANPEVRK TFVTRSRVVQ
FIRNYLNEKA FLEVETPMLQ TIPGGASARP FITHHNALDM DMYLRIAPEL YLKRLVVGGF
ERVYEINRNF RNEGLSTRHN PEFTMLEFYQ AYADYNDLMD LTEDMLRNLA QTVLGDTKVV
NTLPSKGDDE PETVTYDFAQ PFTRLSVFNS ILQYNPELKA ENIDTLEAAR EVAKNLGVQL
KDSYGLGKVQ IEIFEKTVEH RLIQPTFITE YPTEVSPLAR RSDSNPFVTD RFEFFVGGRE
IANGFSELND AEDQAQRFKE QVAEKDAGDD EAMHYDADYV RALEYGLPPT AGEGIGIDRL
VMLLTDSPSI RDVLLFPHMR PE
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