| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1202 |
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| Symbol | |
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| ID | 3967871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1547130 |
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| End bp | 1548617 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920276 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) / transcription elongation factor GreB |
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| Protein accession | YP_526676 |
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| Protein GI | 90020849 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0352571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTATCG GGTTTTCTGG GCGTTATTGC CGCCGCTTTC GCACTAAAGT CACCATTAAC
GGTTTAAAGT TTTTCACTAT GTTTGAAAAT TTATCTGATC GTTTATCGCG CTCCTTTAAA
AAAATTACGG GCAAGGCGCG ACTTAATCAC GACAATATTA AAGACGCGTT GAGCGATGTG
CGCAAAGCGC TGCTTGAGGC CGATGTGGCA TTGCCCGTAG TGAAAGAGTT CACCGGCCAA
GTGCGCAAGC GCGCTCAGGG TCAGGAGGTG TCGCGTGCAC TTAACCCTGG GCAGCAGTTT
CTAAAAATTG TAGAAAGTGA GCTTACCCAA ATTATGGGTG AGGCGAACGA AAAGCTAAAT
TTAGCGGCTC AGCCACCGGC AGTAGTGTTG ATGGCTGGTT TGCAGGGTGC GGGTAAAACA
ACCTCCGTTG CTAAGCTTGC GCGCTTTTTG CGTGAGCGAG AAAAGAAAAA AGTAATGGTG
GTGAGTGCGG ATGTTTACCG CCCAGCAGCT ATTAAGCAGC TAGAAACCCT TGCTACAGAA
GTTGAAGCCG AGTTTTTCCC TTCCGATGCA GGGCAAAACC CTGTCGATAT TGCCAAAAAT
GCGTTGGCAC AAGCTAAAAA GCTGCATGTA GATGTATTGT TAGTGGATAC CGCTGGCCGT
TTGCACGTAG ATGAGGCGTT GATGGAAGAG ATTCAGGCCA TTCATGCGGC GGTGAATCCA
ATTGAAACGC TGTTCGTTAT TGATGCCATG ATCGGTCAGG ATGCGGTGAA CACCGCTAAG
GCGTTTAATG ATGCCTTACC ACTCACGGGT GTAATCTTAA CCAAAACCGA TGGTGATGCA
CGCGGTGGTG CTGCGTTATC GGTGCGCCAT GTAACAGGTA AGCCTATTAA GTTTTTGGGT
GTGGGTGAAA AAACCGAGGC TTTAGAGCCG TTCCACCCCG ACCGTCTAGC TTCCCGCATC
CTTGGGATGG GCGACATTAT GTCGCTTATC GAAGAGGCGG AGCAAAAAAT AGATAAGGTT
AAGGCCGAAA AGTTAGTCCA AAAAGTCCAG AAGGGTAAGT CGTTTGACTT GGAAGATCTG
CGCGATCAGC TTCAGCAAAT GCAGAATATG GGCGGCATGG CCTCTATGTT AGATAAGTTG
CCCGGTATGG GCGGCATGGC CAAAATGGCC GAAAGTAATG GAATGACAAG TCAGTTCAAG
CAGATGCAGG CAATTATCGA TTCGATGACA CCTGCTGAGC GAAAAAATCC CGATGTGCTT
AACGGTTCGC GCAAGCGCCG TATCACTATG GGGTCTGGCA CACAAATTCA AGATCTGAAT
CGTTTGCTCA AACAGCACAA GCAGATGAGC AAAATGATGA AGAAAATGAA GGGCGGCGGC
ATGCAAAAAA TGATGCGCGG CATGGGTGGT ATGCTTCCAG GTGGCGGCTC TGGAGGTGTA
CCTCCAATGG GCGGCGGCGG TGGTTTGCCT CCTGGTTTTG GTTCTTAA
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| Protein sequence | MFIGFSGRYC RRFRTKVTIN GLKFFTMFEN LSDRLSRSFK KITGKARLNH DNIKDALSDV
RKALLEADVA LPVVKEFTGQ VRKRAQGQEV SRALNPGQQF LKIVESELTQ IMGEANEKLN
LAAQPPAVVL MAGLQGAGKT TSVAKLARFL REREKKKVMV VSADVYRPAA IKQLETLATE
VEAEFFPSDA GQNPVDIAKN ALAQAKKLHV DVLLVDTAGR LHVDEALMEE IQAIHAAVNP
IETLFVIDAM IGQDAVNTAK AFNDALPLTG VILTKTDGDA RGGAALSVRH VTGKPIKFLG
VGEKTEALEP FHPDRLASRI LGMGDIMSLI EEAEQKIDKV KAEKLVQKVQ KGKSFDLEDL
RDQLQQMQNM GGMASMLDKL PGMGGMAKMA ESNGMTSQFK QMQAIIDSMT PAERKNPDVL
NGSRKRRITM GSGTQIQDLN RLLKQHKQMS KMMKKMKGGG MQKMMRGMGG MLPGGGSGGV
PPMGGGGGLP PGFGS
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