| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1175 |
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| Symbol | |
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| ID | 3968614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1511685 |
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| End bp | 1513481 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637920249 |
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| Product | agarase |
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| Protein accession | YP_526649 |
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| Protein GI | 90020822 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000232044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000011081 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAAACCA CCAAATGCGC CCTAGCTGCG CTCTTCTTCA GTACCCCTCT TATGGCTGCA
GATTGGGACG GAATTCCTGT CCCAGCGGAC CCAGGGAATG GCAACACCTG GGAGCTACAG
TCCCTTTCTG ACGATTTCAA CTATGCGGCC CCAGCTAACG GCAAAAGCAC CACCTTCTAT
AGCCGCTGGA GCGAAGGCTT TATCAATGCT TGGCTCGGCC CGGGGCAAAC CGAGTTTTAC
GGCCCCAATG CTTCGGTAGA AGGCGGCCAC CTTATTATTA AGGCCACTCG CAAGCCAGGT
ACTACTCAAA TTTACACTGG AGCAATTCAC TCCAATGAAA GTTTTACCTA CCCATTGTAT
TTGGAAGCGC GCACCAAAAT TACAAACCTC ACCCTCGCCA ACGCATTTTG GCTACTAAGC
TCAGATTCCA CCGAAGAGAT TGATGTGCTG GAGTCTTACG GCAGCGACCG TGCAACAGAA
ACGTGGTTTG ACGAACGCCT ACACTTAAGC CATCACGTTT TTATCCGCCA GCCATTTCAA
GACTACCAAC CGAAAGATGC AGGCAGCTGG TACCCCAACC CCGATGGCGG CACTTGGCGC
GACCAATTTT TCCGTATAGG TGTTTATTGG ATAGACCCAT GGACACTGGA GTATTACGTG
AATGGCGAAT TAGTGCGCAC TGTAAGCGGC CCAGAAATGA TTGACCCGTA CGGTTACACC
AACGGCACAG GCCTAAGTAA ACCCATGCAA GTTATTTTCG ATGCAGAGCA TCAGCCTTGG
CGCGACGAAC AAGGTACTGC CCCACCCACC GACGCAGAGC TAGCCGACTC GAGTCGCAAT
CAATTCTTAA TTGACTGGGT GCGATTCTAC AAACCCGTGG CAAGCAACAA TGGTGGCGGC
GACCCAGGCA ATGGCGGCAC CCCAGGTAAT GGTGGCAGTG GCGATACTGT AGTGGTAGAA
ATGGCCAACT TCTCTGCCAC AGGTAAAGAA GGCTCTGCAG TTGCAGGCGA CACTTTCACA
GGCTTCAACC CCAGCGGCGC GAACAACATC AACTACAACA CCTTAGGGGA TTGGGCAGAC
TACACGGTGA ACTTCCCCGC TGCCGGTAAT TACACCGTAA ACCTAATTGC AGCCTCGCCG
GTTACATCTG GGCTGGGTGC AGATATTTTG GTAGACAGCA GTTACGCAGG CACCATACCT
GTTAGCAGCA CCGGAGCTTG GGAGATATAC AACACCTTTA GCTTGCCCAG CTCGATTTAT
ATCGCAAGCG CAGGCAATCA TACTATTCGC GTACAAAGCT CCGGCGGTAG CGCTTGGCAG
TGGAACGGCG ACGAACTTCG CTTTACCCAA ACGGATGCGG ATACAGGCAC CAATCCACCC
AGTACAGCCA GCATAGCGGT TGAAGCCGAA AACTTTAACG CGGTGGGCGG CACCTTTAGC
GATGGTCAAG CTCAACCTGT TAGCGTTTAC ACCGTTAACG GCAACACTGC CATTAACTAC
GTAAACCAAG GCGATTATGC CGACTACACC ATTGCTGTTG CCCAAGCGGG TAACTACACC
ATTAGCTATC AAGCTGGCAG TGGCGTAACA GGTGGTAGCA TAGAGTTTTT GGTTAACGAA
AACGGAAGCT GGGCCAGTAA AACCGTTACC GCCGTACCAA ACCAAGGTTG GGATAACTTC
CAACCCTTAA ACGGAGGCAG CGTTTACCTA AGCGCAGGCA CCCACCAAGT TCGTTTACAC
GGCGCTGGCA GCAACAACTG GCAGTGGAAC CTAGATAAGT TCACGCTTAG CAACTAA
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| Protein sequence | MKTTKCALAA LFFSTPLMAA DWDGIPVPAD PGNGNTWELQ SLSDDFNYAA PANGKSTTFY
SRWSEGFINA WLGPGQTEFY GPNASVEGGH LIIKATRKPG TTQIYTGAIH SNESFTYPLY
LEARTKITNL TLANAFWLLS SDSTEEIDVL ESYGSDRATE TWFDERLHLS HHVFIRQPFQ
DYQPKDAGSW YPNPDGGTWR DQFFRIGVYW IDPWTLEYYV NGELVRTVSG PEMIDPYGYT
NGTGLSKPMQ VIFDAEHQPW RDEQGTAPPT DAELADSSRN QFLIDWVRFY KPVASNNGGG
DPGNGGTPGN GGSGDTVVVE MANFSATGKE GSAVAGDTFT GFNPSGANNI NYNTLGDWAD
YTVNFPAAGN YTVNLIAASP VTSGLGADIL VDSSYAGTIP VSSTGAWEIY NTFSLPSSIY
IASAGNHTIR VQSSGGSAWQ WNGDELRFTQ TDADTGTNPP STASIAVEAE NFNAVGGTFS
DGQAQPVSVY TVNGNTAINY VNQGDYADYT IAVAQAGNYT ISYQAGSGVT GGSIEFLVNE
NGSWASKTVT AVPNQGWDNF QPLNGGSVYL SAGTHQVRLH GAGSNNWQWN LDKFTLSN
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