Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1153 |
Symbol | |
ID | 3968397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1489623 |
End bp | 1490672 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637920224 |
Product | putative RNA 2'-O-ribose methyltransferase |
Protein accession | YP_526627 |
Protein GI | 90020800 |
COG category | [R] General function prediction only |
COG ID | [COG2933] Predicted SAM-dependent methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.203097 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACTAA TCTGCCTTTG CCGCCAAGGT TTCGAAAAAG AAGTGGCCGC AGAAATAACT GATTGTGCAG CTTACGCAGG TATTGCCGGT TATGTAAAAA CCAACGCAGA TACAGGTTAT GTAGAATTTG TATTGCCAGA TCTAGATAGT GCAACCGCAC TGTTTGAAGC CATTCGTTTC GACGATTTAG TGTTTGTGCG GCACTGGTTT GTAACCCCGG CTATTGCCAG CGATTTGCCG AAAGAAGACA GAGCCTCACC ATTAATGGCA TCTGCACAGG CGCTGCCTCC GCTCGCTAAG CTCGAACCCA TTACGCTGGA TACCAACGAT GGCAAGGCCC TAGTGGCGCT TACACGCGGA GTGACTAATC ATATGCGCAC CGTGTTTAAA AAAGCGGGTG CGTTTAATGC TAAAAGCGAT TGGGTTGGGC AGGTATTATT TTTCTCGGGC GAGCAGGCCT GTATTGGGTA TTTTCCACAA AGCAACGGTT CTTTGTGGGT AGGGGGGATT CCTCGGTTGC GCGCCCCCAA AGACGCGCCT AGCCGTGCAA CACTCAAACT AGAAGAGGCG TGGCATCAAT TTATACCCCG CGAACAATGG GACCAACGCA TAGCGCCATC TATGCGCGCA GTCGATCTCG GCGCAGCCCC TGGCGGGTGG ACATGGCAGC TAGTAAACAA AAGTATGTTT GTGGAAGCGG TAGATAACGG CCCCATGGCA GAAAATATTA TGGCTAGCGG GCAAGTAACT CATCGAATGG AAGATGCTTT TCGCTTTGCC CCAGAGCGAG CTGTACATTG GTTGGTAAGC GATATTGCCG ATAAACCCGC GCGCGTGGCT GAGCTAATAA CACGCTGGGC TGAGAACAAG TGGTTTAAAG AGGCTGTGTT TAATTTAAAA TTACCGATGA AAAAGCGTTA TATAGAACTG CAACTGTGCA GCGAAATTAT TACTCTAGCA TTGGATAACG CAGGTATAGA ATATACCTTG AAGTTCAAGC AGCTCTACCA CGATAGAGAA GAGGTAACTG GGCATTTGGT GCTGTTTTAG
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Protein sequence | MILICLCRQG FEKEVAAEIT DCAAYAGIAG YVKTNADTGY VEFVLPDLDS ATALFEAIRF DDLVFVRHWF VTPAIASDLP KEDRASPLMA SAQALPPLAK LEPITLDTND GKALVALTRG VTNHMRTVFK KAGAFNAKSD WVGQVLFFSG EQACIGYFPQ SNGSLWVGGI PRLRAPKDAP SRATLKLEEA WHQFIPREQW DQRIAPSMRA VDLGAAPGGW TWQLVNKSMF VEAVDNGPMA ENIMASGQVT HRMEDAFRFA PERAVHWLVS DIADKPARVA ELITRWAENK WFKEAVFNLK LPMKKRYIEL QLCSEIITLA LDNAGIEYTL KFKQLYHDRE EVTGHLVLF
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